| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_4110 |
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| Symbol | |
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| ID | 3936599 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | - |
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| Start bp | 4218540 |
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| End bp | 4219229 |
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| Gene Length | 690 bp |
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| Protein Length | 229 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637906496 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_512052 |
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| Protein GI | 89056601 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.681193 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTTGCCC TGGCCGACCA ACGGGTGCTG ATCACTGGGG CCGCCCACGG GCTTGGCGCG
GGCATCGCGC GGGTCTTTGC GGCCGACGGC GCTGATCTGA TCCTGATGGA CCGTGACATG
CCTGCCGACC CCGATGGGAC GTTCATTCAG GTGGACTTTG CCGATGCCAG TGCCACGCGG
GCCGCGCTTG ACCAAATTGG CGGCCCCATC GACACGCTGA TCCACAATGC CGCCATCCTG
CGCCCCGAGC CGCTGGAAGA GGTCAGTTTT GCCACCTTCC GCGCCACATT GGACGTGGGC
ATCCAGGCGG CGTTTCAGCT GTCGCAGGCG GTCTGGCCGG GGATGAAGGC GCGGGGCGGC
GGTGCGCTGA TCTTCGTGTC GTCGCAATCG GGGATCAAGG GCTTCGTGGA TGAAACCGCC
TATTGCGCCG CGAAACACGC ATTGGAAGGC TTCTCCAAAT GCCTCGCCAT GGAGGGCGAG
GCCCATGGCA TCACATCGCA CACCGTGACG CCGGGCAAGC CGATGCGCAC GCCCATGTCG
GAGGCGAATT ACCCACCTGA GCTGAAGGCC CAGTGGATCG ACCCCGCGCG CCTTGCGCCC
GCCTTCGCCC ACCTCGCCAC CACCCGCGAC CCGGCGCTAT CGGGCCAGCG CCTGAACGCC
TGGGACCTGT CACAGGAGCA CCCGCTATGA
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| Protein sequence | MLALADQRVL ITGAAHGLGA GIARVFAADG ADLILMDRDM PADPDGTFIQ VDFADASATR
AALDQIGGPI DTLIHNAAIL RPEPLEEVSF ATFRATLDVG IQAAFQLSQA VWPGMKARGG
GALIFVSSQS GIKGFVDETA YCAAKHALEG FSKCLAMEGE AHGITSHTVT PGKPMRTPMS
EANYPPELKA QWIDPARLAP AFAHLATTRD PALSGQRLNA WDLSQEHPL
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