| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_4093 |
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| Symbol | |
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| ID | 3936582 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | + |
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| Start bp | 4199587 |
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| End bp | 4201344 |
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| Gene Length | 1758 bp |
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| Protein Length | 585 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637906479 |
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| Product | ABC transporter related |
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| Protein accession | YP_512035 |
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| Protein GI | 89056584 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.433587 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCCGAA AACCGACCCG CGGTGCCTTC GCCCGCGTCC TTTCCTTTGC CGGGTCCAGA
TGGGCTCGTC GGCCCGGCCG ACTTAGCGTA ATCTTGGTCC TTCAGGTCGT CTCGACGGGC
GCCGATGTCT CAATCCCGAT CCTGACCGGA CGGCTTGTCG CTTCGGTGGC TGAGAACGGC
GCGCCGTGGG CGGCGTTCTA CGGTCTTCTT GCCCTTGGCG TGCTGTCCAT TGTGACCAAA
ATCGCGAGCT ACTTCGCGAT CATCGATCTG ACAATCCCGA CCATGCAGGA GGTGGAGGCC
GAAGCCTTCG CCCGTGTTCA GCGCCTGCCA GCGTCTTGGC ACGCCAACGC CTTCGCGGGC
TCAACCGTGC GTAAGATCAC GCGGGGGGCC TGGGCGCTTG ATGACATGGG CGACCTTCTG
ATGCTGGCGC TTGGGCCTTC GGTGCTTGTG CTGATTGGTA CAATCGCGAC GCTCACTGCC
TTTCGGGTAG AGGTCGGGTT AGTCGCGCTG CTGGGAGCGG CTTTCTTCGT GACGGTCTCT
CTTGTCCTTA CGCTCAAATG GGTCGCTCCG GCGGCGCGAT TGGCAAACGC GCAAGACAGC
CGTGTCTCAG GTGCCCTGGC AGATGCGATC ACGTCAAATG CCGTCGTGAA AGCCCATGCC
GCAGAGGCGC GTGAAGACGC TCGGCTCGAA CGGGTGCTGG ACAAGTGGGC ACATCGGAGC
AGGCGGACAT GGCGGCGGGG AACGTGGTCG GGCCTCGTAC AGGATATGTG CCTCTGGGTC
CTGCGGGCGC TTGTGCTTGG CGGCGCACTT CTGGCCTTCA TGCGCGGCGC GGCCGGTGCG
GGAGAGATCG CTTTCACGGT CTCTGCCCTC GGCATGCTCG ACGGATATCT GCGCCAGATC
GGCAACCACG TTCGCAACCT CCAGAAGGCG GTCAACGACG CCGAAGAGAT GGTGGAATTG
ATGGAGGACG CCGCCGAGAC GGACGTGGTC CGCCCCCCGG CGCGCAGCCT GCCGCCCCGC
GCCGCAGCAC TTTCTTTCGA CCACGTGGGA TACGGATACG ACGGCGCACA GACGCCGCTT
TTCACTGATC TGCATGTTGT CATCCCAGCG GGCCAAAAGG TCGGTCTCGT TGGGCGTTCG
GGGTCTGGCA AGACCACATT TGTCAAGCTC ATCCAGCGCC TGCATGAGGT AACCGGCGGG
GCGATCACGC TGAATGGCGT CGACATCGCG TCGGTCCCGT TGGCCGACTT GCGGGCCAAC
GTCGCGTTAG TCCCGCAAGA GCCGATCCTG TTCCACCGCT CCCTGGGCGA GAACATTGCC
TATGCCAATC CGGAGGCGAC CATCCAGGAC GTGCGCGCCG CAGCAGGCAA GGCGGGCGCG
GCGGAGTTCA TCGACCGGTT GGAAAAAGGA TACGGCACCG AGGTGGGAGA GCGCGGTGTC
AAGCTTTCCG GCGGTGAGCG TCAACGGGTC GCGATCGCAC GGGCCTTCCT GTCGGACGCG
CCCGTTCTGG TCATGGATGA AGCGACCTCT TCGCTCGATA GCGAGGCGGA GGCGCGTGTG
GCAGAGGCGG CTGAGCGGCT CATGGAGGGG CGCACAACGC TTGTGATCGC GCATCGGTTG
GCGACGGTCG AACGGATGGA CCGGATCCTG GTCTTTGATC GGGGGCGTAT TGTCGAGGAC
GGCACGCCCA CCGAGTTGTT GGCGCGGCGG AATGGGCTGT ATCGGTCGCT GAGGGAGAAG
CAGACATTGG TGGCGTAA
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| Protein sequence | MSRKPTRGAF ARVLSFAGSR WARRPGRLSV ILVLQVVSTG ADVSIPILTG RLVASVAENG
APWAAFYGLL ALGVLSIVTK IASYFAIIDL TIPTMQEVEA EAFARVQRLP ASWHANAFAG
STVRKITRGA WALDDMGDLL MLALGPSVLV LIGTIATLTA FRVEVGLVAL LGAAFFVTVS
LVLTLKWVAP AARLANAQDS RVSGALADAI TSNAVVKAHA AEAREDARLE RVLDKWAHRS
RRTWRRGTWS GLVQDMCLWV LRALVLGGAL LAFMRGAAGA GEIAFTVSAL GMLDGYLRQI
GNHVRNLQKA VNDAEEMVEL MEDAAETDVV RPPARSLPPR AAALSFDHVG YGYDGAQTPL
FTDLHVVIPA GQKVGLVGRS GSGKTTFVKL IQRLHEVTGG AITLNGVDIA SVPLADLRAN
VALVPQEPIL FHRSLGENIA YANPEATIQD VRAAAGKAGA AEFIDRLEKG YGTEVGERGV
KLSGGERQRV AIARAFLSDA PVLVMDEATS SLDSEAEARV AEAAERLMEG RTTLVIAHRL
ATVERMDRIL VFDRGRIVED GTPTELLARR NGLYRSLREK QTLVA
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