| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_4071 |
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| Symbol | |
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| ID | 3936559 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | - |
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| Start bp | 4177913 |
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| End bp | 4178818 |
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| Gene Length | 906 bp |
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| Protein Length | 301 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637906456 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_512013 |
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| Protein GI | 89056562 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.0957932 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATTGGC GTGATATTCC CTCCCTCTCG GCGCTGCGGG CATTTGAGGC CGCGGCCCGT
CTGGGGTCTT TGTCGGAGGC GGCCCGGGCG CTCAACGTGA CCCATGCCGC CATCGCCGCC
CATGTGCGCG CGTTGGAGAC GGAGTTCGGC CAGCCGCTCC TGCGCCGCTC CGGGCGCGGC
ATGGTTCCGA CACAGGCCGG CGCCGAGTTG GCGCGTGATC TGGGGACAGG CTTCGCCGAG
ATCGCCGCCG GGGTCCGTGC CCTCAAACGC GGACGCGAAG ATCGCCCCGT GACGCTGACC
ACCACCCCCA GCTTCGCGGA GAACTGGCTG ATGCCCTGCC TCGCCGCCTT CTGGTCCGCG
CATCCCGACG TTCCCCTGTC GGTGCAGACA GATCAGAACA TGGTCGATCT GCGCCGCGAG
GGGGTGGACC TGGCCATTCG CCACGGCACG GGTCCATGGC CCGGACTTGA AGGGATCGTG
TTGACCCAGG CCAAGATGGT CGTTGTGGGC CAACCGGGTC GGTTTGGACC CAGCCCCGAT
GACCTGACCA GCCGGGAGGC CTGGGACCGT GTCCTGACCC TTCCGTGGCT GCTCGACCAA
TCCCATACGG AGTTCAACAA ACGCCTGTTG CGGCTCGGCA TTGATCCCGA AAAGCTGACC
TCGACGGCGC TGGGGTCCAA TGCGCTGCTG TTGCCTGCCT GCCGTGCGGG TGGCGGTGTC
TCGGCACAAC CCCACGCCCT GGTGGAGACC GACATCGCCG ACGGTCGCCT TGAAGTGCTG
GCGGAGGAGG TGAACACCGA TTACGCCTAT CACCTGCTGC ACCTGCCGGG ACCGCTGTCA
CGACGGGCGC AGACCTTCGT CACCTGGCTG CGCCGCGAGT CGCGCTGCAT CGCCGGATCC
AGTTAG
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| Protein sequence | MDWRDIPSLS ALRAFEAAAR LGSLSEAARA LNVTHAAIAA HVRALETEFG QPLLRRSGRG
MVPTQAGAEL ARDLGTGFAE IAAGVRALKR GREDRPVTLT TTPSFAENWL MPCLAAFWSA
HPDVPLSVQT DQNMVDLRRE GVDLAIRHGT GPWPGLEGIV LTQAKMVVVG QPGRFGPSPD
DLTSREAWDR VLTLPWLLDQ SHTEFNKRLL RLGIDPEKLT STALGSNALL LPACRAGGGV
SAQPHALVET DIADGRLEVL AEEVNTDYAY HLLHLPGPLS RRAQTFVTWL RRESRCIAGS
S
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