| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_4004 |
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| Symbol | |
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| ID | 3936492 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | - |
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| Start bp | 4107634 |
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| End bp | 4108986 |
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| Gene Length | 1353 bp |
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| Protein Length | 450 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637906389 |
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| Product | putative branched-chain amino acid ABC transporter, periplasmic branched-chain amino acid binding protein |
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| Protein accession | YP_511946 |
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| Protein GI | 89056495 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.781532 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTGTAAGA CCCCGCTGCT GGGAGGCGCG GGTAAAAGAA ATCGGAAAAA CATCCATGGG
AGGAATGACC CGATGAAGAA AGTGACTTTG ATTGCAGTGG CCGCAGCGGT GGCCGCAGGA
AGCCCGGCGG CGGCGGACCT GGTGTTCCCA AGCCTCAGCT ACCGGACCGG GCCCTATGCG
GCGGGTGGTA TCCCGTTTGC GGATGGCTAT GCCGATTACA TGACCCTGCT CAATGAGCGC
GATGGCGGCA TTGGCGGCGT GATGACACGC GTGCCCGAGT GCGAGACGGC GTACAACACC
GAGCGCGGCG TGGAATGCTA TGAGAGCACG CGCGGCGAAG GGGCGTTGGT CTATCAGCCG
CTGTCGACCG GTATTACCTA CCAGTTGATC CCGCGTACGA CCGTGGACGG CATCCCGCTT
CATACGATGG GCTATGGCCG GACCTCTGCT GCCAATGGCG ATGTGTTCAG CCACACGTTC
AACTACCCGG CCAACTATTG GGACGCGGCC TCCGTGATCG TGAACCAGTT GCTGGAAGAG
AACGACGGCA GCCTTGAGGG GCAGACGATT GCGCTCCTCT ACCACAACTC CGCCTATGGT
CGGGAGCCGA TCCGCACGCT GGAAACGCTG TCGGAGCAGC ACGGGTTTGA GTTGAGCCAG
TTGGCCGTCG ACCACCCCGG CCAGGAGCAG GGCAACCAGT GGTTGCAGAT CCGCCGCGAG
CGTCCCGATT ATGTCGTGAT GTGGGGCTGG GGCGTGATGA ACCAGGTCGC CATCCAGGAG
GCGATCAACG TGCGCTATCC GATGGAGAAC TTCATCGGCA ATTGGTGGGC CGGCGCGGAC
CATGATGTGG AATCCGCAGG CGCCGATGCG GCGGGTTACC GCTCGCTCAA CATGAATCGC
CTGGGCGACA TGCCGGTCTT TGCCGAAATT CAGGAGCACG TCATTGATGC GGGCTTGAAT
GCCGGTGACG GCACGAACCT GGGCAATGTG CTGTATACGC GCGGCATGTA TGCGGCGATG
CTTGCGGCGG AAGCGGCGGC CACGGCGCAG GAGATCCACG GCGTGGCCGA GATCGACGCC
AGCATGATGC GCGACGGCAT GGAGGCGCTG GAGATCACCA ACGCCCGCAT GGAAGAGCTT
GGCATGCCGG GCATCGGGCC GGAATTCGCG GTGACCTGTG AAGACCACGG CGGCACCGGC
ATGGCGATCA TGCAGCAATG GGACGGCGAG GCCTGGGTGA CGCTCACCGA CTTCATCGCG
CCGGACGATA GCGTGACGCA GCCGCTGGTT CTGGAAGATT CGGCGCAATA TGCCGAGGAA
AACGGGATCG AGAGCCAGTG CGGCGAGAGC TGA
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| Protein sequence | MCKTPLLGGA GKRNRKNIHG RNDPMKKVTL IAVAAAVAAG SPAAADLVFP SLSYRTGPYA
AGGIPFADGY ADYMTLLNER DGGIGGVMTR VPECETAYNT ERGVECYEST RGEGALVYQP
LSTGITYQLI PRTTVDGIPL HTMGYGRTSA ANGDVFSHTF NYPANYWDAA SVIVNQLLEE
NDGSLEGQTI ALLYHNSAYG REPIRTLETL SEQHGFELSQ LAVDHPGQEQ GNQWLQIRRE
RPDYVVMWGW GVMNQVAIQE AINVRYPMEN FIGNWWAGAD HDVESAGADA AGYRSLNMNR
LGDMPVFAEI QEHVIDAGLN AGDGTNLGNV LYTRGMYAAM LAAEAAATAQ EIHGVAEIDA
SMMRDGMEAL EITNARMEEL GMPGIGPEFA VTCEDHGGTG MAIMQQWDGE AWVTLTDFIA
PDDSVTQPLV LEDSAQYAEE NGIESQCGES
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