Gene Jann_3928 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJann_3928 
Symbol 
ID3936409 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJannaschia sp. CCS1 
KingdomBacteria 
Replicon accessionNC_007802 
Strand
Start bp4024436 
End bp4025599 
Gene Length1164 bp 
Protein Length387 aa 
Translation table11 
GC content64% 
IMG OID637906306 
Producthypothetical protein 
Protein accessionYP_511870 
Protein GI89056419 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATTGC CCACCTACGC AGGGATGCTT GAAGACTACA CGCTAGTTGG GGAGCCTTTG 
ACCCCGCGCG CACCTTATGT GCCGCTGACC CGTACCGCCT TTGCCGCGGC CCATGTGATC
AGCGATCCTT TGGCCGAACG GGACCCCTGG CAAGGCCGCC CCGCCGTGGA TTGGGAGGCG
ACGCTGAGGT TTCGGGAGGG GCTTTGGGAT CAGGGGCTTC ACCTTGCCGA GGCCATGGAT
ACCGCGCAGC GGGGCATGGG CGTGGATTGG GCCACCGCGC GTGAGTTGAT TGAGCGGACA
ATGGCTGCCG CGAAAGCGCA TCCCGCCCGT CCCCGCGTGG CCTGTGGCGC GGGCACGGAT
CACGTGGCTG CGGAGGCGTT AACCAACCTG GGCAGCATCC GCGACGCCTA CATGCACCAG
ATGGACGCGA TCGAGGCCGC CGGCGGGCGG CTGATCCTGA TGGCCACCCG CGCCCTGCCC
GCAATTGGGG CGGGGCCGGA GGATTATGCC CGCCTCTACG ATGATCTCAT CACGCAGGCC
GAAGCGCCCG TGATCCTTCA TTGGTTGGGC GACATGTTTG ATCCCGGCCT GCGGGGCTAT
TGGGGCAGCG ACGACGTGGA TCAGGCCAAT GATGTCGTCC ACGATCTGAT CGCGCGCACC
GCGCCCAAGA TCGACGGCAT CAAGATTTCC CTTCTGGATC AGTCCCATGA GGAAGCGTTC
CGTAAACGCC TACCCGATGG CGTTCGCCTC TACACAGGCG ACGATTTCAA CTACGCCAGT
TTGATTGAGG GCGACGGCGC GCATTACTCC CACGCACTTC TGGGGATCTT CGCGGCCATT
GCCCCCGCCG CGTCCCAGGC GTTGGAGGCC CTGGCGCAGG GCGATGCCGG TGCGTATCAC
GGGCTGCTCG CGCCGACGGT CCCGCTGAGC CGCGAGATCT TCAAAGCGCC CACGCAATAT
TACAAGGCGG GCATTGCGTT TCTGGCCTGG CTCAACGGCG CGCAGTCGCA TTTCATCATG
CCGGGCGGGT TCCAATCCTC CCGCGATATC AGTCACTTCG CGGAGGTGTT CCGCCTTGCC
GACCAAGCGC GGCTACTGAC GGACCCGGAC CAAGCCATGC GGAAAATGGG CAACCTTCTG
GCGCTTCACG GGATCGAGGG TTAG
 
Protein sequence
MKLPTYAGML EDYTLVGEPL TPRAPYVPLT RTAFAAAHVI SDPLAERDPW QGRPAVDWEA 
TLRFREGLWD QGLHLAEAMD TAQRGMGVDW ATARELIERT MAAAKAHPAR PRVACGAGTD
HVAAEALTNL GSIRDAYMHQ MDAIEAAGGR LILMATRALP AIGAGPEDYA RLYDDLITQA
EAPVILHWLG DMFDPGLRGY WGSDDVDQAN DVVHDLIART APKIDGIKIS LLDQSHEEAF
RKRLPDGVRL YTGDDFNYAS LIEGDGAHYS HALLGIFAAI APAASQALEA LAQGDAGAYH
GLLAPTVPLS REIFKAPTQY YKAGIAFLAW LNGAQSHFIM PGGFQSSRDI SHFAEVFRLA
DQARLLTDPD QAMRKMGNLL ALHGIEG