Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Jann_3918 |
Symbol | |
ID | 3936399 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Jannaschia sp. CCS1 |
Kingdom | Bacteria |
Replicon accession | NC_007802 |
Strand | - |
Start bp | 4014192 |
End bp | 4014869 |
Gene Length | 678 bp |
Protein Length | 225 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637906296 |
Product | CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase |
Protein accession | YP_511860 |
Protein GI | 89056409 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0558] Phosphatidylglycerophosphate synthase |
TIGRFAM ID | [TIGR00560] CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCAGTGGA ACGTGCCCAA TATCCTCACC CTCGTGCGCC TGATCGCGGC GCCTATGGTG GGGTTTGTGT TCCTGCTTCT GCCACGTCCT TTCGCCGATT GGGTGGCGCT GTTTCTTTTC ATGGCGGCGT CAATGACCGA CTATCTGGAC GGTCTTCTGG CGCGCAAATG GGGGCAGGAA AGCCGCTTTG GCGCGATGCT GGACCCGATT GCCGATAAGG CCATGGTGGT GATCGCGCTG GCGGTTCTGC TGGTGATCAT GAGCCTGGAC CACGGGTGGT CGGCCTTGAT CCTGGTGCCA GTCATCGTCA TCCTGTTCCG GGAGATATTC GTCTCTGGCC TGCGTGAATT TCTGGGCGCG CATGCGGGCA CGTTGCAGGT CACCAAGCTG GCGAAATGGA AGACGACGTT GCAGATGGTG GCCATTGGCC TGCTGTTTTG CTGGGGTCTT TTCACTCATT ATTTCTGGGC GTTGACCTTC GGCATGGACG CGGCGTTGAT TGACGGGATC ATGTCGGGCG ACATCCCCGA TGAATTCGGC TTGATCTGGA TCGAGTTCGG CTTCTTCTGG AGCGGTGTCG TAGGGCAAGT GCTCCTGTGG GTTGCGGCCC TTCTGACGGC GATCACAGGG TTTGACTACT ACATGAAAGC ACGGCCCTTT TTGCAGGAGG ACAGCTGA
|
Protein sequence | MQWNVPNILT LVRLIAAPMV GFVFLLLPRP FADWVALFLF MAASMTDYLD GLLARKWGQE SRFGAMLDPI ADKAMVVIAL AVLLVIMSLD HGWSALILVP VIVILFREIF VSGLREFLGA HAGTLQVTKL AKWKTTLQMV AIGLLFCWGL FTHYFWALTF GMDAALIDGI MSGDIPDEFG LIWIEFGFFW SGVVGQVLLW VAALLTAITG FDYYMKARPF LQEDS
|
| |