| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_3883 |
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| Symbol | |
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| ID | 3936364 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | - |
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| Start bp | 3980597 |
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| End bp | 3981406 |
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| Gene Length | 810 bp |
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| Protein Length | 269 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637906261 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_511825 |
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| Protein GI | 89056374 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.0678915 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGCCTTT CCATCCAAGG CAAAACCGCC ATCGTCACCG GCGCCGCCAA CGGCGTGGGC
CTGGCGATTG CGCGCCATTT CATCGACTGC GGCGCGAATG TCATGTTCGC TGATCGCGAC
AAGACCCGCC TGAAAGACGA ATGCGGCGAG ACCGAGGGCG ATGACGAGAA GATCCGCTAC
TTCTCGGGCG ATCTGCGCGA GCGTCTGACG GTTGAGAACC TCGTATCCGC AACCATCGAC
GCCTATGATC GTGTGGATAT TCTGGTGAAC GCGTCGCGTC AGGTGCAGAC GACTGATCCG
CTGGATGCTG CCGACACATC GGTTGAGGGC ATGCTGAACC AGAACCTGTT CCCATCCCTG
CGCCTGACCC AGTCCGTGGC CAAGCGCATG ATTGCCCAGG CCGAAGACGA CGGGCATGTG
GATGGGCCGA TTGGGTCAAT CGTCAACATC TCCTCCATTG CCGCTCGCCG CACGCATCCG
GACCTGATGG GCTATTCTAT CGCGACGGCA GCCCTGGATC AGGCCACTCG CAGTCTTGCC
GTGGCGCTGG CGGGCAATCG CATCCGCGTC AATGGCGTGG CGTTCGGGTC CGTTATGTCC
GCGAGCCTGA AGGATTCGTT GAACGAGACC GATGGCCTGC GCGAAGAAAT CCGTGAATGC
ACGCCCATGG GCCGCATCGC ATCCGCGAAA GAGGTGACGG CGGCAGTGCA GTTCCTTGCG
TCTGATGCGT CAGGCTTCGT GACCGGAGAG GTCATCACCG TCGATGGCGG GCGCACGCTT
TTGGATGCCG TTACGACGGC AGCGCACTGA
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| Protein sequence | MGLSIQGKTA IVTGAANGVG LAIARHFIDC GANVMFADRD KTRLKDECGE TEGDDEKIRY
FSGDLRERLT VENLVSATID AYDRVDILVN ASRQVQTTDP LDAADTSVEG MLNQNLFPSL
RLTQSVAKRM IAQAEDDGHV DGPIGSIVNI SSIAARRTHP DLMGYSIATA ALDQATRSLA
VALAGNRIRV NGVAFGSVMS ASLKDSLNET DGLREEIREC TPMGRIASAK EVTAAVQFLA
SDASGFVTGE VITVDGGRTL LDAVTTAAH
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