| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_3861 |
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| Symbol | |
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| ID | 3936341 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | - |
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| Start bp | 3958058 |
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| End bp | 3959377 |
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| Gene Length | 1320 bp |
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| Protein Length | 439 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637906239 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_511803 |
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| Protein GI | 89056352 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4239] ABC-type uncharacterized transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGCTCC CCTCCGATCA GCCCATCCTG CCACCGATGC CGGATCCGCC CCAAGGTGCT
CTGTCTCCCC AGGACGATAC CCGTGGCGGC TGGCTCAACC CGCTCAACCG CCGCCGGTGG
CGTAACTTCA AGGCCAATCG TCGTGCGCTA TGGTCACTCT GGCTGTTCGC GATCCTCTAT
GGCCTCAGCC TTTTTGCGCC GTTGCTGGCC AACGACCGCC CCCTTATGGT CACTTACCAG
GGAGAGCGTT ACTACCCGAT CTTCAACTTC TACCCCGAGA CCCAGTTTGG CGGTGATTTC
CGGACCGAGG CCGTCTATCG CGATATCGAA GTGCAATGCC TCATCATCTC GGGCGGGCTG
GAGAATTGCT GGGACGACCC GGAATATGTG ATCGAGCAGA TCGAGACGAC CGGCCATTTT
GAAACGGCAA CGGTGCAACA GGGCTCTATC ACCTGGCCGC TGGTGCCGCA CGACTTCTCC
TCCATCGTGG ATCGGCCCGG TGTGGCCCCC GCGCCGCCGA ATGTGGTCAA CGGCTACTAC
ACGTCTCTCG TTGATCCAGA CGCCGCTCCG GTGTTCGGGC TGCCCGAAGA CGCCGACCCC
GACGAGTGGT CCTACAGCTT CGGCTTTCTC CCCGAGGAGC TGGCCGGCAC GAATTTTCTG
GGCACCGATG ATACGTCCCG CGATGTGATG GCGCGCGTGA TCTACGGCTT CCGGCTGTCG
GTCAGTTTCG CGCTGATCGT GACGCTTCTG GCGTCGGTCA TCGGGGTTGC TGCGGGCGCG
GTGCAGGGCT TTTTCGGGGG GTGGATCGAC CTTGGCTTCC AGCGCATCAT CGAGGTCTGG
AATGCCACCC CCAGCCTTTA CATCATCATC ATCATGGCCA CGATTTTCCC AATGAGCTTC
TGGCTGTTGG CCGGATTGAT GGTGGCGTTC GGCTGGACCG GTCTGGTGAG CGTGGTGCGG
GCGGAATTCC TGCGCGCCCG CAACTTTGAA TATGTCCGCG CCGCCCGTGC CCTTGGGGTG
GGCAGCGGCA CGATCATGTT CCGTCACGTG TTGCCCAACG CGATGGTCGC CACGTTGACA
TTCATGCCCT TCATCGTGAC CGGCACCATC GGAGGCTTGG CATCACTGGA CTTTCTGGGC
TTCGGCCTGC CATCATCCGA GCCTTCGTTG GGTGAGATGA CGCTTCAGGC CAAAAACAAC
CTGCAAGCCC CGTGGCTTGG TTTCACGGCC TTTTTCACCT TCGCCATCAT GCTGTCACTG
CTGGTCTTCG TCTTTGAAGG TATCCGCGAC GCGTTCGATC CCCGAAAGAC ATTCTCATGA
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| Protein sequence | MALPSDQPIL PPMPDPPQGA LSPQDDTRGG WLNPLNRRRW RNFKANRRAL WSLWLFAILY
GLSLFAPLLA NDRPLMVTYQ GERYYPIFNF YPETQFGGDF RTEAVYRDIE VQCLIISGGL
ENCWDDPEYV IEQIETTGHF ETATVQQGSI TWPLVPHDFS SIVDRPGVAP APPNVVNGYY
TSLVDPDAAP VFGLPEDADP DEWSYSFGFL PEELAGTNFL GTDDTSRDVM ARVIYGFRLS
VSFALIVTLL ASVIGVAAGA VQGFFGGWID LGFQRIIEVW NATPSLYIII IMATIFPMSF
WLLAGLMVAF GWTGLVSVVR AEFLRARNFE YVRAARALGV GSGTIMFRHV LPNAMVATLT
FMPFIVTGTI GGLASLDFLG FGLPSSEPSL GEMTLQAKNN LQAPWLGFTA FFTFAIMLSL
LVFVFEGIRD AFDPRKTFS
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