Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Jann_3783 |
Symbol | |
ID | 3936263 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Jannaschia sp. CCS1 |
Kingdom | Bacteria |
Replicon accession | NC_007802 |
Strand | - |
Start bp | 3867175 |
End bp | 3868134 |
Gene Length | 960 bp |
Protein Length | 319 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637906161 |
Product | hydroxymethylglutaryl-CoA lyase |
Protein accession | YP_511725 |
Protein GI | 89056274 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0119] Isopropylmalate/homocitrate/citramalate synthases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCCGCG CCGCCATTCC CATGCCAGAG GGCAGCCATG TGACAGTGTG CGAGGTCGGC CCACGCGACG GGTTCCAAAG CGAAAAGACT TTCATCCCGA CTGCCCGCAA GATCGAGATT GCGAATGCCA TGTTCGCCGC CGGTTTGCGC CATATCCAGG TGACGTCCTT CGTCAGCCCC CGCGCCGTGC CGCAACTGGC GGATGCGGCA AAGCTGATCG CTGGGCTGGA CCGGCCCGAT GGTGCGGTCG TCTCGGCCTT GATCCCCAAC CTGAAAGGGG CGGAACGCGC GGCGGCGGCC GGGGTGGATG CGGTCCACAC CGTCGTCTCG GCGTCCGAGA CCCATAACCT TAAGAATGTG AACCGCCCCA TCGACCAGTC ACTGGCTGAT TTTGAGGACG TCGCAAAACT GATGCATCGC GAGGGCATCG TGGTGGAGGG CGGCATGGCG ACAGCGTTCG GCTGCCCCTT TGAGGGCGTC GTTCCGCCCG AACAGGTCGC CCGCATCGCC AGACGGTATC AGGACTTGGG CGCCAAGCGG GTCAGCCTGG GTGACACGAC GGGTATGGCG ACCCCAACAA CTGTCCGCGC CGCCGTTCGG GCCATCCGCG CCGAGGCGCC GGGGGTGGAA ATCTGCCTCC ACTTCCACAA TACGCGCGGT GTCGGCCTCG CCTGCGTCAT GGCGGGTCTG GCCGAGGGAG TCAGCTACTT CGATGCGGCG ATCGGCGGGC TTGGCGGGTG CCCGTTTGCG GCGGGGGCCA CGGGCAATAT CTGCACCGAG GATTTGGTCT ATCTTCTTGA AGAAAGTGGA TACCGCACCG GAGTGGATCT TGAGGCGTTG ATTTCCGTCG CCGGTCTGGC GCAGGAGACC ATCGGACGCG ACCTGCCGGG GCAGGTCATG AAGGCGGGGC CGCGCCTGCG CCGCTATGAT CCCGCGCTGA CCGTCACGGC GCAGGGATGA
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Protein sequence | MSRAAIPMPE GSHVTVCEVG PRDGFQSEKT FIPTARKIEI ANAMFAAGLR HIQVTSFVSP RAVPQLADAA KLIAGLDRPD GAVVSALIPN LKGAERAAAA GVDAVHTVVS ASETHNLKNV NRPIDQSLAD FEDVAKLMHR EGIVVEGGMA TAFGCPFEGV VPPEQVARIA RRYQDLGAKR VSLGDTTGMA TPTTVRAAVR AIRAEAPGVE ICLHFHNTRG VGLACVMAGL AEGVSYFDAA IGGLGGCPFA AGATGNICTE DLVYLLEESG YRTGVDLEAL ISVAGLAQET IGRDLPGQVM KAGPRLRRYD PALTVTAQG
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