| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_3779 |
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| Symbol | |
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| ID | 3936259 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | - |
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| Start bp | 3863621 |
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| End bp | 3864904 |
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| Gene Length | 1284 bp |
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| Protein Length | 427 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637906157 |
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| Product | TRAP C4-dicarboxylate transport system permease DctM subunit |
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| Protein accession | YP_511721 |
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| Protein GI | 89056270 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG4664] TRAP-type mannitol/chloroaromatic compound transport system, large permease component |
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| TIGRFAM ID | [TIGR00786] TRAP transporter, DctM subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.738122 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGGCGC TGACGCTGAC GGGCATCCTG GCGGGCTACC GTATTGGCAT GGTGTTGGCG
GGCGCTGCGG CGCTGTTCAT CCTGATCTCG GATCTGCCGG TCGCCTATTT CAACCTGCTG
GTCAGTCGTA TCTACGCCAA CGTGCTGTCC AACTGGCTCT TGGTGGCGAT CCCGATGTTC
ATCCTGATGG GGCTGATTTT GGAGATTTCG GGGGTTGCCG AAAGATCGCT GCGTGCGGCC
CAACGGGCAC TTGGCGGCAG TGCAGCGGGC ATGGGGATTT CAGTTCTGGT GATCGGCGTG
CTTCTGGCGG CGTCGTCCGG CATTGTGGGG GCAAGTGTCG TGTTGCTGGC CCTTCTGGCG
CTGCCCCGAT TGGAGGAGGC GGGCTATGAC AAACCCACAT CGGCGGGTCT GGTGGCGTCT
TCGGGGACAC TGGCGATCTT GATCCCGCCA TCGGTCATGC TGATCGTGCT GGGCGATCAG
TTGCAGACCC CCGTGCCCGC GATGTTTGCA GGCGCGATCT GGCCCGGGCT CATCCTCGTG
GGTTGTTACG GCCTCTACAT CCTGTGGCGC GCGCGCAAAT TGCCACCCAT GACCAATGTT
GATCGTGTGC CCCCATGGCG GCTTCTGGTG GATCTTGGCC CGCTTCTGGC CTTGGTCATC
TCTGTACTTG GATCCATCAT AAGCGGCCTC GCCACGCCCA CGGAGGCCAG TGGCCTTGGC
GCATTCGGCG CGGTCCTGAT CACATTGATC TATGGCAGGT TCAGCGTCGC CATGCTGATG
GAGGCCGCAA GAAAAACCGT CATAACCACC GCCATTGTGC TGTTCGTAAT GATCGGGGCC
ACGTGCTTTT CAGCCGTCTT CAAGGGCGTT GGTGGCGATG ATCTGGTTGA GGCCGGGATC
ATGGCGTTCG GCTCAGACCC CTATACGGTG CTGGCCGTGG TCATGGCGGC GATTTTCATC
CTTGGCTTCG TGCTGGATTG GCTGGAGATC ACCCTGATCC TGATCCCGAT CTTCGCCCCC
ATCGTGGCAG GGCTGGATTT CGGCAACGGG CTGGCCGGGC GGGACCTGCT GGTCTGGTTC
GGCATCCTGG TGGCGGTGAA CCTTCAGACC TCTTTCCTGA CGCCGCCCTT CGGCTTTTCG
CTGTTCTACC TGCGTGGTGC GGCAGGCGAT CGTCTGACCA CTCCGCAGAT CTACAGGGGG
GTGGCCCCCT TCATCGCGTT GCAAGTCGCC GTGCTTGTGG CGCTGATCCT GTTTCCCGGA
CTGATCACCG GGTTTTCACC ATGA
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| Protein sequence | MAALTLTGIL AGYRIGMVLA GAAALFILIS DLPVAYFNLL VSRIYANVLS NWLLVAIPMF
ILMGLILEIS GVAERSLRAA QRALGGSAAG MGISVLVIGV LLAASSGIVG ASVVLLALLA
LPRLEEAGYD KPTSAGLVAS SGTLAILIPP SVMLIVLGDQ LQTPVPAMFA GAIWPGLILV
GCYGLYILWR ARKLPPMTNV DRVPPWRLLV DLGPLLALVI SVLGSIISGL ATPTEASGLG
AFGAVLITLI YGRFSVAMLM EAARKTVITT AIVLFVMIGA TCFSAVFKGV GGDDLVEAGI
MAFGSDPYTV LAVVMAAIFI LGFVLDWLEI TLILIPIFAP IVAGLDFGNG LAGRDLLVWF
GILVAVNLQT SFLTPPFGFS LFYLRGAAGD RLTTPQIYRG VAPFIALQVA VLVALILFPG
LITGFSP
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