Gene Jann_3738 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJann_3738 
Symbol 
ID3936218 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJannaschia sp. CCS1 
KingdomBacteria 
Replicon accessionNC_007802 
Strand
Start bp3821213 
End bp3821704 
Gene Length492 bp 
Protein Length163 aa 
Translation table11 
GC content57% 
IMG OID637906116 
Productsignal transduction protein 
Protein accessionYP_511680 
Protein GI89056229 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.970304 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGAAACC GAATGATTGC TTTAGCCCTA GAGCTTATGA TGGGGCCGAT TGCGCCCGCT 
TTTGCCCAAG AGGGAGAAGG TCGGAGATTA TCTGAACTCG CCTTCCAATC GCTGGATCGG
GCGCAGCGCG GCTTTGTCGA TCAAGGTGAA TTCGTAAGCT TCGGCAGCGA CGTGTTCTTC
TCCATCGACA ACGATGCGGA TGGGGCAATG ACACTCGCCG AGTTCATGGA CTGGGGCTTT
GGGATGGAGC AGGTGGCAGA GGCCGCCGAC CGCACCAATG CCTATGAAAC CGCCTTGCGC
GTCGTCTTCG CCTTCTGGGA TCTCAACGGA GACGGGTCCA TTTCGCAGAC CGAGCATCGA
CAGTCTCTTA TGACGGATTT CCGCCGGGCA GACTTCGACC ACGATGCACT TCTGACAGAA
GAAGAGTTTC TGCACGGCTT CTCACTGCTG ATCGCGGTGC GGGCGGCCAT TGACCCAACC
CCAGTCGAGT AA
 
Protein sequence
MRNRMIALAL ELMMGPIAPA FAQEGEGRRL SELAFQSLDR AQRGFVDQGE FVSFGSDVFF 
SIDNDADGAM TLAEFMDWGF GMEQVAEAAD RTNAYETALR VVFAFWDLNG DGSISQTEHR
QSLMTDFRRA DFDHDALLTE EEFLHGFSLL IAVRAAIDPT PVE