Gene Jann_3720 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJann_3720 
Symbol 
ID3936200 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJannaschia sp. CCS1 
KingdomBacteria 
Replicon accessionNC_007802 
Strand
Start bp3805152 
End bp3805526 
Gene Length375 bp 
Protein Length124 aa 
Translation table11 
GC content52% 
IMG OID637906098 
ProductNa+/H+ antiporter subunit 
Protein accessionYP_511662 
Protein GI89056211 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1320] Multisubunit Na+/H+ antiporter, MnhG subunit 
TIGRFAM ID[TIGR01300] monovalent cation/proton antiporter, MnhG/PhaG subunit 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCTTTG CTGCAGAACT CCTGATATCG ATCGCCTTGG TCGTCAGCGG CCTTTTTGGC 
TTGGTCGGCT CATACGGGTT GGTGAAACTC AAAGACACGC TGCAACGGCT GCACGCTCCA
ACCAAAGCCA CCACCCTTGG CGTTGGTGGA GTCCTTATTG CGTCCATGAT CTTCTTCTAT
ATGGAGACCG GGCACATCTC GGTTCACGAG TTGCTGATTT CTATGTTTCT CTTTCTGACT
GCACCGATTA CGGCGAACTT CATCGCTAAA GCCTATTTGG CACGAAACAA GCGCCAGGAA
GACCTGCCTT CGAGCGAAGG AGATTTCGGG TGGTCAGTCT ACGATGACCC ACCTAACGCG
GGTTCTGATC ATTAG
 
Protein sequence
MSFAAELLIS IALVVSGLFG LVGSYGLVKL KDTLQRLHAP TKATTLGVGG VLIASMIFFY 
METGHISVHE LLISMFLFLT APITANFIAK AYLARNKRQE DLPSSEGDFG WSVYDDPPNA
GSDH