| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_3691 |
|---|
| Symbol | |
|---|
| ID | 3936170 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Jannaschia sp. CCS1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007802 |
|---|
| Strand | - |
|---|
| Start bp | 3772982 |
|---|
| End bp | 3773458 |
|---|
| Gene Length | 477 bp |
|---|
| Protein Length | 158 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637906068 |
|---|
| Product | cation antiporter |
|---|
| Protein accession | YP_511633 |
|---|
| Protein GI | 89056182 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1863] Multisubunit Na+/H+ antiporter, MnhE subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATATAT TTGCCCTCAA CGTCGCGCTG GCCATCGCCT GGGCCGCCCT GACCGGCGAC
ATTACCCTGC CGAATATTCT GATCGGGTTC GCGCTGGGCT CTGCCGCGCT GTTCGTCACG
CGGCCGCTCT ATCCGGGGTG TGAGCGCTAC TTCACCCGCG CCACGAGCTG GGTGAAGCTG
ATCCTCGCGT TTCTGTGGGA ATTGGTCGAA GGCTCGATCC AGGTCGTGGG GGACGTGCTG
ACACCGCAGC ACCGCTCCCG CCCCGGGATC ATCGCGGTGC CCCTCGACAC CCATCGCGAG
ATGTCGCTGC TGGTCCTGAC CAATTACATT TCGCTGACCC CCGGCACCCT GTCGCTGGAC
GTGACCGAGG ATTGCAGGAC ACTCTACATC CACGCGATGT TCGCCGATGA TCCCGATGCC
ATCCGCGCCT CGATCAAGAA TGGCGTGGAG ATGCGCGTGA AGGAGGCCAT GGAATGA
|
|---|
| Protein sequence | MNIFALNVAL AIAWAALTGD ITLPNILIGF ALGSAALFVT RPLYPGCERY FTRATSWVKL
ILAFLWELVE GSIQVVGDVL TPQHRSRPGI IAVPLDTHRE MSLLVLTNYI SLTPGTLSLD
VTEDCRTLYI HAMFADDPDA IRASIKNGVE MRVKEAME
|
|---|
| |