| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_3652 |
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| Symbol | |
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| ID | 3936130 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | - |
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| Start bp | 3726126 |
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| End bp | 3726710 |
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| Gene Length | 585 bp |
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| Protein Length | 194 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637906028 |
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| Product | uracil-DNA glycosylase superfamily protein |
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| Protein accession | YP_511594 |
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| Protein GI | 89056143 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1573] Uracil-DNA glycosylase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.0557217 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATCTCG CTCAGGACAT CGCGGCTTGC CAGATCTGTG CCGACCGTTT TGCGCAGACC
TACCCGGGTC ACGCTCCGCG CCCCGTTGTC TGGTTCCGTC CCGGCGCGCG CATCCTTGTG
GCGGGCCAGG CGCCGGGGAT GCGGGTGCAT CGTTCGGGCC AGCCCTTCAC TGATCCCTCC
GGCGACCGCC TGCGCGACTG GATGGGGGTG GATGAGAAAA CGTTCTACGA CAAGGATCGG
GTCGCGATCC TGCCGATGGC CTTCTGTTTT CCGGGGTATG ACGCGAAGGG GGCGGATCTG
CCACCACCCA AAATCTGTGC CAGAACCTGG CGTGGTCCCT TGCTTGACGC TTTGGGAAGG
GTCCGCCTGA CGCTATTGGT CGGGGGCTAT GCGCAGGGCT GGCATCTGGG TGACAAGACG
ACGGTCACGG CGCGGGTCGA AGCGTGGCGG GATCATGCGC CTGCGGTCTT CCCCTTGCCT
CATCCGTCGT GGCGCAATAC CGGGTGGTTG AAGCGACATC CGTGGTTCGA AGCAGAGCTT
TTGCCCGTCC TGCGGGCTCG CGTGGCAGAG GAGTTGGCGC GATGA
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| Protein sequence | MNLAQDIAAC QICADRFAQT YPGHAPRPVV WFRPGARILV AGQAPGMRVH RSGQPFTDPS
GDRLRDWMGV DEKTFYDKDR VAILPMAFCF PGYDAKGADL PPPKICARTW RGPLLDALGR
VRLTLLVGGY AQGWHLGDKT TVTARVEAWR DHAPAVFPLP HPSWRNTGWL KRHPWFEAEL
LPVLRARVAE ELAR
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