Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Jann_3552 |
Symbol | |
ID | 3936027 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Jannaschia sp. CCS1 |
Kingdom | Bacteria |
Replicon accession | NC_007802 |
Strand | + |
Start bp | 3615322 |
End bp | 3616473 |
Gene Length | 1152 bp |
Protein Length | 383 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637905927 |
Product | hypothetical protein |
Protein accession | YP_511494 |
Protein GI | 89056043 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0626] Cystathionine beta-lyases/cystathionine gamma-synthases |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTGATG GACCGGACAT TGCGACCGTC CTCGCGTCGG TGCTGGCCGA CGATGGTGGG TCCATGACGC CGCCAATCGT GCAGACGTCC CTGTTCGCCT TCGACAACTA CGCGGCGTTT GAGGCGCGCA TGGCCGGGGA CACCGACACC GCCATCTATA CCCGCGTGCA AAATCCCACC GTTGCGGCGT TCGAAGGGTT GATGGCGCAG GCCGAAGAGG GAGAGGCCGC TGTAGGCTTC GCCTCGGGCA TGGCGGCGAT CAGCTCCACG CTTCTGGCCT TCGTCAAACC CGGCGACCGG ATTGCCTGCA TCGAACACGC CTATCCCGAC ACCTACCGTT TTTTTGAACG GATGCTGCGG CCCTTTGGTG TCCAGATCGA TTACCACCCC GCCCGCGCGT TTGAGGATGA CCCCGATCTG CTTAACGGGG TTGCCATTGC CTATCTGGAA AGTCCCAGCT CGGTCGTTTT CACGCCGATG AATTTGGCCC GTGTGGCAGA GCACGCAACG CGCCACGGCA CAGTGACAAT GATCGACAAT TCCTGGGCCA GCCCGGTGTT CCAACGCCCC CTCACGCTGG GGATCGACAT CGTGCTGCAC TCGGCCTCGA AGTACATTTC GGGCCACTCA GACACGGTTG CGGGCGTGGT GGTGTCCTCC CACGCCCATA TCGCCCGCAT CCGTGATCTG ACCTTGCCGC TTCTGGGCGC GAAACTTGCG CCGTTTGAAG CCTTTCTTCT CACCCGTGGC CTGCGCACCT TGAAGGTGCG GATGATGCAG CATCAGGCGA CGGCGGATCT GTTCGTGGAC CGGTTGGCTG CGGTGCCACA GGTGCGCAGG ATCAACAGCC CCGGCGCCAA CGCGGTGCCC GGCCTGACGG GCCGCTCCGG TCTGATGTCC ATCGAATTCG ACGACACCGT TGATATCCCA GCATTTGCCG ACGCGTTCAC TCATTTCCGG CTTGGCGTCA GCTGGGGCGG TTTTGAAAGT CTCGTCCTGC CGGCGCGCGT CGCCTTGGCG CAGGCGGGCG AGCACAATTC ACTGCAAGCG TTCGGCGTAT CCCCAAATCT GGTGCGCCTG AACCTTGGCT TGGAAGATCC AGAAGACCTT TGGGCAGATT TTGAATCTGC CCTGAGTGCA AGTCTGACCT GA
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Protein sequence | MSDGPDIATV LASVLADDGG SMTPPIVQTS LFAFDNYAAF EARMAGDTDT AIYTRVQNPT VAAFEGLMAQ AEEGEAAVGF ASGMAAISST LLAFVKPGDR IACIEHAYPD TYRFFERMLR PFGVQIDYHP ARAFEDDPDL LNGVAIAYLE SPSSVVFTPM NLARVAEHAT RHGTVTMIDN SWASPVFQRP LTLGIDIVLH SASKYISGHS DTVAGVVVSS HAHIARIRDL TLPLLGAKLA PFEAFLLTRG LRTLKVRMMQ HQATADLFVD RLAAVPQVRR INSPGANAVP GLTGRSGLMS IEFDDTVDIP AFADAFTHFR LGVSWGGFES LVLPARVALA QAGEHNSLQA FGVSPNLVRL NLGLEDPEDL WADFESALSA SLT
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