Gene Jann_3552 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJann_3552 
Symbol 
ID3936027 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJannaschia sp. CCS1 
KingdomBacteria 
Replicon accessionNC_007802 
Strand
Start bp3615322 
End bp3616473 
Gene Length1152 bp 
Protein Length383 aa 
Translation table11 
GC content62% 
IMG OID637905927 
Producthypothetical protein 
Protein accessionYP_511494 
Protein GI89056043 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0626] Cystathionine beta-lyases/cystathionine gamma-synthases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTGATG GACCGGACAT TGCGACCGTC CTCGCGTCGG TGCTGGCCGA CGATGGTGGG 
TCCATGACGC CGCCAATCGT GCAGACGTCC CTGTTCGCCT TCGACAACTA CGCGGCGTTT
GAGGCGCGCA TGGCCGGGGA CACCGACACC GCCATCTATA CCCGCGTGCA AAATCCCACC
GTTGCGGCGT TCGAAGGGTT GATGGCGCAG GCCGAAGAGG GAGAGGCCGC TGTAGGCTTC
GCCTCGGGCA TGGCGGCGAT CAGCTCCACG CTTCTGGCCT TCGTCAAACC CGGCGACCGG
ATTGCCTGCA TCGAACACGC CTATCCCGAC ACCTACCGTT TTTTTGAACG GATGCTGCGG
CCCTTTGGTG TCCAGATCGA TTACCACCCC GCCCGCGCGT TTGAGGATGA CCCCGATCTG
CTTAACGGGG TTGCCATTGC CTATCTGGAA AGTCCCAGCT CGGTCGTTTT CACGCCGATG
AATTTGGCCC GTGTGGCAGA GCACGCAACG CGCCACGGCA CAGTGACAAT GATCGACAAT
TCCTGGGCCA GCCCGGTGTT CCAACGCCCC CTCACGCTGG GGATCGACAT CGTGCTGCAC
TCGGCCTCGA AGTACATTTC GGGCCACTCA GACACGGTTG CGGGCGTGGT GGTGTCCTCC
CACGCCCATA TCGCCCGCAT CCGTGATCTG ACCTTGCCGC TTCTGGGCGC GAAACTTGCG
CCGTTTGAAG CCTTTCTTCT CACCCGTGGC CTGCGCACCT TGAAGGTGCG GATGATGCAG
CATCAGGCGA CGGCGGATCT GTTCGTGGAC CGGTTGGCTG CGGTGCCACA GGTGCGCAGG
ATCAACAGCC CCGGCGCCAA CGCGGTGCCC GGCCTGACGG GCCGCTCCGG TCTGATGTCC
ATCGAATTCG ACGACACCGT TGATATCCCA GCATTTGCCG ACGCGTTCAC TCATTTCCGG
CTTGGCGTCA GCTGGGGCGG TTTTGAAAGT CTCGTCCTGC CGGCGCGCGT CGCCTTGGCG
CAGGCGGGCG AGCACAATTC ACTGCAAGCG TTCGGCGTAT CCCCAAATCT GGTGCGCCTG
AACCTTGGCT TGGAAGATCC AGAAGACCTT TGGGCAGATT TTGAATCTGC CCTGAGTGCA
AGTCTGACCT GA
 
Protein sequence
MSDGPDIATV LASVLADDGG SMTPPIVQTS LFAFDNYAAF EARMAGDTDT AIYTRVQNPT 
VAAFEGLMAQ AEEGEAAVGF ASGMAAISST LLAFVKPGDR IACIEHAYPD TYRFFERMLR
PFGVQIDYHP ARAFEDDPDL LNGVAIAYLE SPSSVVFTPM NLARVAEHAT RHGTVTMIDN
SWASPVFQRP LTLGIDIVLH SASKYISGHS DTVAGVVVSS HAHIARIRDL TLPLLGAKLA
PFEAFLLTRG LRTLKVRMMQ HQATADLFVD RLAAVPQVRR INSPGANAVP GLTGRSGLMS
IEFDDTVDIP AFADAFTHFR LGVSWGGFES LVLPARVALA QAGEHNSLQA FGVSPNLVRL
NLGLEDPEDL WADFESALSA SLT