| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_3500 |
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| Symbol | |
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| ID | 3935974 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | - |
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| Start bp | 3555481 |
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| End bp | 3556335 |
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| Gene Length | 855 bp |
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| Protein Length | 284 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637905874 |
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| Product | 5-carboxymethyl-2-hydroxymuconate delta-isomerase |
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| Protein accession | YP_511442 |
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| Protein GI | 89055991 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0179] 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.00347788 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAATACG CCAGCTACAT CGCCCACGGG CAGCCCTATT ACGGGGCGGT GACCGACGCT
GGCATGATTG CGCTCAGCCC TGATCTGCCC CAATGGGAGA GCCTTTTTGA CGTCCTCCGG
GCCGGGCAGT TCGATCGCCT GGCCAAAGTC GCGGAGGGTA AATCCGTCAC CCATACCAAG
TTCACCTACG ACATGGTTCT GCCGGATGCG CAGCGTATCT TATGTGTTGG CGTCAACTTC
CCGGACCGCA ACGCCGAGTA TAAGGACGGC AGCGAGACGC CCAAATACAT GTCGCTCTTT
CCCCGGTTCT CGTCGGGCTT TACCGGCCAC GACCAACCTC TGATCCGTCC GCCTGAAAAT
CATACGCTGG ATTATGAGGG AGAGGTGGTC GTCGTCATCG GCAAGGCGGG CCGGCGCATC
AGCCAGGATG ACGCCTATAA CCACATCGCT GCCCTCACCA TCTGCAATGA GGGTACGATC
CGCGATTGGG TGCGGCACGC GAAATTCAAC GTGACCCAGG GCAAGAACTG GGACCGATCC
GCCGCGATGG GTCCATGGCT TGTGCCGTTT ACAGATGCGA GCCTGCTGGA CGATGCGCGC
ATCATCACCC GCGTGAACGG AGAGGTTCGC CAAGACGACA CGCTCAGCCG CATGATGCAT
CCGATCCGGC GGCAAATTGA ATACATCTCG ACCTTCATGA CGCTTCAGCC CGGCGATGTG
ATCGTCACGG GCACGCCCAC GGGCGCAGGC GCGCGGTTCG ACCCGCCGCG TTACCTGGTG
CCCGGAGATC TTGTAGAAGT AGAGGTCAGC ACCATCGGTA CCTTGCGCAA TGGCATTGCG
GATGAAACGC CATGA
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| Protein sequence | MKYASYIAHG QPYYGAVTDA GMIALSPDLP QWESLFDVLR AGQFDRLAKV AEGKSVTHTK
FTYDMVLPDA QRILCVGVNF PDRNAEYKDG SETPKYMSLF PRFSSGFTGH DQPLIRPPEN
HTLDYEGEVV VVIGKAGRRI SQDDAYNHIA ALTICNEGTI RDWVRHAKFN VTQGKNWDRS
AAMGPWLVPF TDASLLDDAR IITRVNGEVR QDDTLSRMMH PIRRQIEYIS TFMTLQPGDV
IVTGTPTGAG ARFDPPRYLV PGDLVEVEVS TIGTLRNGIA DETP
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