Gene Jann_3475 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJann_3475 
Symbol 
ID3935949 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJannaschia sp. CCS1 
KingdomBacteria 
Replicon accessionNC_007802 
Strand
Start bp3527328 
End bp3527777 
Gene Length450 bp 
Protein Length149 aa 
Translation table11 
GC content64% 
IMG OID637905849 
Producthypothetical protein 
Protein accessionYP_511417 
Protein GI89055966 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.515316 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACACGGG GGATAAGGAA AACCGGAATT GAGCGGTGGG CCCGCTGCGG GCAGACTTGG 
ACGCAGACCC GCCCCTTCAA GGACCCCAGC CCCATGACCC GCCTATGTGC CAAACTCGCC
CTGATCCTCG CGCTTCTCAC GCCCCTGACG GCCCATGCAA CCGCCGATGG CCCCGATGCC
TGGCGCGTGC AGGGCGTCGC TTCCCACGAT CATCTGAATG TGCGCGTCGG CCCCGGCGTG
GATTACTTCG TCATCGACGC GCTGCCTCAC AATGCGCGTC AGGTTCAGGT TGTTGTCTGC
ACGCCCACGA CAACGCGTGA GCAGTACTTC GCGCTCCCCC ATCATCTGCA ACAGCGGCTC
AACAGCTATT CCACATGGTG CCTGGTGAAC TGGAACGGCC ACCAGCGTGG CTGGGTCAAC
CGCCGCTTCC TGACGGAGGA TGGGGTCTGA
 
Protein sequence
MTRGIRKTGI ERWARCGQTW TQTRPFKDPS PMTRLCAKLA LILALLTPLT AHATADGPDA 
WRVQGVASHD HLNVRVGPGV DYFVIDALPH NARQVQVVVC TPTTTREQYF ALPHHLQQRL
NSYSTWCLVN WNGHQRGWVN RRFLTEDGV