| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_3417 |
|---|
| Symbol | |
|---|
| ID | 3935891 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Jannaschia sp. CCS1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007802 |
|---|
| Strand | - |
|---|
| Start bp | 3463988 |
|---|
| End bp | 3464578 |
|---|
| Gene Length | 591 bp |
|---|
| Protein Length | 196 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637905791 |
|---|
| Product | riboflavin synthase subunit alpha |
|---|
| Protein accession | YP_511359 |
|---|
| Protein GI | 89055908 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0307] Riboflavin synthase alpha chain |
|---|
| TIGRFAM ID | [TIGR00187] riboflavin synthase, alpha subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.544383 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTCACAG GAATTGTCAC CGATCTGGGA GAGGTCCGCG CGCTGGAGCA TCGCGGGGAC
CTGCGCGCGC GCATCGGCAC CGGCTATGAT ATGGCGACGG TTGATCTGGG CGCCTCCATC
GCGTGTGACG GCGTGTGTTT GACCGTGGTG GCCATGGGGG CGGATTGGTT CGATGTCGAT
ATCTCGGCGG AATCCGTCTC CAGGACCAAT ATCGGGGCGT GGGAGGTCGG GGCGCGGCTG
AACCTCGAGC GGGCGTTGAA GGTGGGCGAT GAGTTGGGCG GGCACATCGT GTCGGGCCAT
GTGGACGGCG TGGCAGAGAT CCTGTCGGTG GTGGATGAGG GCGACAGCAC ACGCTTCACC
TTCCGCGCGC CGGGGGAATT GGGGCGGTTC GTGGCCCCCA AGGGCTCGGT CGCGCTGAAC
GGAACCTCCC TGACGGTCAA TGAGGTGGAT GGATCCGAGT TCGGGGTGAA TATCATCCCC
CACACCAAGG AGGTCACGAC CTGGGGCGTG GCAAAGGCGG GCGACCGGGT GAATTTCGAG
ATCGACACGC TGGCGCGCTA TGTCGCGAGG CTGGCCGATT GGACCGGGTA G
|
|---|
| Protein sequence | MFTGIVTDLG EVRALEHRGD LRARIGTGYD MATVDLGASI ACDGVCLTVV AMGADWFDVD
ISAESVSRTN IGAWEVGARL NLERALKVGD ELGGHIVSGH VDGVAEILSV VDEGDSTRFT
FRAPGELGRF VAPKGSVALN GTSLTVNEVD GSEFGVNIIP HTKEVTTWGV AKAGDRVNFE
IDTLARYVAR LADWTG
|
|---|
| |