Gene Jann_3350 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJann_3350 
Symbol 
ID3935823 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJannaschia sp. CCS1 
KingdomBacteria 
Replicon accessionNC_007802 
Strand
Start bp3403594 
End bp3404112 
Gene Length519 bp 
Protein Length172 aa 
Translation table11 
GC content60% 
IMG OID637905723 
Productheat shock protein Hsp20 
Protein accessionYP_511292 
Protein GI89055841 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0071] Molecular chaperone (small heat shock protein) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGATCG CTTGCCTTGA GGATGTGCCG CAGATGACGA AACTGACCCT TGCCTCCCAC 
CCCTATCTTC TGGGGTTTGA CCAGTTGGAA CGGCTGGTTG AGCGCACCGC CAAATCCGGA
AATGAGGGCT ATCCGCCCTA TAATATCGAA CAGCGGGGCG AGAACGCCTA CCGCATCACC
CTGGCCGTTG CGGGCTTTGC CGAGGATGAT TTTTCGATCA CCGTCGAAGA CCGTCAGCTG
GTGATCCGGG GAAAGCAGAT CGACGCCGAT CAGGATCGTG TCTTCCTGCA CCGGGGCATC
GCAACCCGCC AATTCCAGCG CAGCTTCGTG CTGGCCGACG GGGTCGATGT GGCGGGCGCC
GAGATGGAGA ACGGGCTTCT CCACGTCGAT CTTACGCGCG TGGTGCCGGA CAGCGTTGTG
CAGACCATCA AGATCCAGAC GGGCCAGTCG GCCACCACCA AACTCGAGAC CGCCAATTCC
GAAGCCACCA ATCCCAAAGC CAGAGGAGAC AGCCAATGA
 
Protein sequence
MQIACLEDVP QMTKLTLASH PYLLGFDQLE RLVERTAKSG NEGYPPYNIE QRGENAYRIT 
LAVAGFAEDD FSITVEDRQL VIRGKQIDAD QDRVFLHRGI ATRQFQRSFV LADGVDVAGA
EMENGLLHVD LTRVVPDSVV QTIKIQTGQS ATTKLETANS EATNPKARGD SQ