Gene Jann_3332 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJann_3332 
Symbol 
ID3935805 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJannaschia sp. CCS1 
KingdomBacteria 
Replicon accessionNC_007802 
Strand
Start bp3382773 
End bp3383012 
Gene Length240 bp 
Protein Length79 aa 
Translation table11 
GC content61% 
IMG OID637905705 
Producthypothetical protein 
Protein accessionYP_511274 
Protein GI89055823 
COG category[S] Function unknown 
COG ID[COG2960] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.296234 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.385711 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGACGC GTAACAAAGT AATGGACGAC CTCAGCCAGC TGATGACCAA CGCGATGGGC 
GTGGCCCAGG GCGCGAAGGA TGAGGCCGAG ACGGCGATGA ATTCCATGAT GGATCGCTGG
CTGGCGAACC GGAACCTTGT GACCCGCGAA GAATTCGACG CAGTGCGCGC CATGGCCCAG
AAGGCCCGGG AAGAGAACGA AGCGCTGAAA GCGCGGATCG AGGCGCTGGA AGCCAAGTAA
 
Protein sequence
MQTRNKVMDD LSQLMTNAMG VAQGAKDEAE TAMNSMMDRW LANRNLVTRE EFDAVRAMAQ 
KAREENEALK ARIEALEAK