| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_3311 |
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| Symbol | |
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| ID | 3935784 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | - |
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| Start bp | 3364359 |
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| End bp | 3367295 |
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| Gene Length | 2937 bp |
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| Protein Length | 978 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637905684 |
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| Product | helicase-like |
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| Protein accession | YP_511253 |
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| Protein GI | 89055802 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4581] Superfamily II RNA helicase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0505804 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.0528841 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCGACA CTCGCACCGG TGGACGGGTT GCGGCCATTC TTGGCCCGAC CAATACCGGC
AAAACCCACT ATGCCATTGA GCGGATGCTG GCGCATCGGA CGGGCGTCAT TGGCCTGCCC
CTGCGCCTTC TGGCGCGGGA GGTCTACGAT AAGGTCGTGG CCATCAAGGG CCCGTCCGTC
GTGGCCCTGG TCACGGGCGA GGAGCGGATC GTGCCACCCC GCGCCGCCTA TTGGGTCTGC
ACGGTGGAGG CGATGCCCAC CGCCTCGGGC GCGGATTTTC TGGCGGTGGA TGAGATCCAG
TTGTGTGCCG ATCCAGAGCG CGGCCATGTG TTCACCGACC GCCTGCTGCA CGCGCGTGGC
CTGCACGAGA CGCTGTTCAT GGGTGCCTCG ACCATGCGCA ATGCCATTGC CGAACTCGTG
CCCCATTGCG AATTCATGCA CCGGGACCGT TTTTCACAGC TTGTGTATGC AGGTTCGAAA
AAGATGAGCC GGATACCCGG ACGCTCGGCA ATCGTGGGGT TTTCGGTCGA AAATCTATAT
GCCACCGCTG AGTTGTTGCG GCGCACCAAA GGAGGTGCTG CGGTGGTCAT GGGCGCGCTC
AGCCCCCGCA CGCGGAACGC TCAGGTGGAG CTATACCAGA ACGGCGACGT GGACATCCTG
GTCGCCACGG ACGCCATCGG GATGGGCCTG AACCTCGACA TCAAGCATGT CGCGTTTTCG
GGCACGCGCA AGTTCGACGG GCGCAAGATG CGCGAGTTGT GGCCCAACGA GTTGGCCCAG
ATCGCAGGGC GCGCCGGGCG GCACACCCAA GACGGCAGCT TCGGTGTGAC CGGAGAGGCG
GAGCCCTTCG ATGACGGCCT CGCCGATGCC ATCGTCAACC ACCGCTTCGC GCCGGTGCGC
AAGTTGATGT GGCGGAATTC CGCGCTGGAG TTTGGCAGCG CGGAGCGGTT GATCGCCAGC
CTGGAGATGC GCACCGATGA TGAATGGCTG ACCCGCGCGC GGGAGGCCGA TGATGTGCAG
GCGCTGAAAG CGCTGATCGC CCGGCCAGAG GTTGCCGCAC GACTGGGCGA TGCGCGCGCC
GTCAAGCTGC TGTGGGACGT CTGCAACATC CCGGACTTTC GCGGCATCAG CCACGCGGAA
CATGCGGATC TGTTGGGCCG GATCTTCGAG TTCCTCCATG AGCATCGCCG CGTCCCCGAC
GATTGGCTCG CGCGGCAGGT CAAACGTATC GACCGGCCCG AGGGGGACAT CGACACGCTG
TCCAAACGCC TCGCCTATAT CCGTACCTGG ACGTATGTCG CGCAACGCAC GGGGTGGGTC
GATGACGAAA GCCATTGGCG CGGCGCGACG CGTGCCGTAG AAGACCGCCT GTCAGACGCG
CTTCACCAGG CGCTGACGTT GAGATTTGTC GACCGGCGGA CGAGTGTTCT CCTTCGCCGG
TTGAAGCAGA GGGAGAGCCT TGTGGCCGAA GTGAACGAGA ATGGCGAAGT CAGCGTAGAG
GGTCAGGTCC TGGGTCGGAT CGAGGGCTTT CGCTTCCGCA TGGACGAATC TGCGACCGCC
GATGAGGCCA AGACGCTGCA AAGCGCGGCG ATGGCGGCCC TGCGGCCTGA GTTCCACCTG
CGCGCGGACC GCATGTATAA TGCGCCCGAC ACCGAATTCG ACCTGACGGA ACAAGGTGGC
CTGATGTGGG GTGACATGGC CGTGGGCAAG CTGGTGAAGG GGCCGGAGGC GCTGAAACCG
CTGGCCGAGG CCTTCGTCGA TGCCGATGCG GGTGCGGAAG TGGTGCAAAA GGTGCAGCGC
CGGTTGCAGC ATTTCATCGA CCGCCGCATC GCCGCCCAGT TCGAGCCGCT TTTGGCGATG
TCGCGCGATG AGGCTGTCAC CGGCCTGGCG CGCGGTGTGG CATTCCAGCT GCTGGAAGGC
TTCGGCATCG TGCCACGCGG CGAGATTGCC GATGATATCA AGGCCCTGGA TCAGGATGCG
CGCGGGTTGT TGCGCAAACA CGGCGTGCGG TTCGGGCAAT ATACGATCTT TCTGCCGCTG
CTGCTGAAGC CCGCGCCGAC GCGACTGCGG TTGGTGCTTT GGGGGCTGGC ACAGGATTTC
GACACCTTCC CCGACAGCCC GCCCCCGGGC CTCGTCACCA TTCCCACCGA AGAAGGCGCG
CCTGCGGGCC ACGCTACGAT GGCCGGGTAC CGCGAAGCGG GCACCCGCGC GATCCGCGTC
GATATGCTGG AACGTCTGGC CGACATGCTG CGCGGTGAGA ACAGCCGCAG CGGGTTTGAA
GCGTCCCCCG ACATGCTGTC GATTTCCGGC CTGACACTGG AGCAATTCGC CGATCTGATG
GGCGGATTGG GCTATAAGGG CGAAAAGGCG GAGCGGCCCA AGGTGAAGGC GGCCAAGGTG
GCCGAGGCGG CAAAGGCCGA GGAGGAGGCG AAGCCCGAGG AGGCCGCGCC CGCTGAGGAG
GCGTCAGCCG AGGAAGCCCC CGCCGAAGGC GCATTGGCCG AGCCAGCGCC CGCCGAGGGC
GCGAGCGAGG CCCCGGCACC CGAGGCCCCT GCCGAGGTCA CGCCGGAGGC CGACGCCGAG
GCACCGCCAT CTGAGCCACC CGCGCCCGAG GGGCCAGCCG AAATGGAGGT CTACTATACC
TTCACCTGGG CGCCGCGCGG ACGCGGAAGC GCCCGTCCCC GCCGCCAGGA CGGCGCGCAG
GGTGGCGCCC GCGCCGACGG TGAGCACGGC AAGCGCAGCG ACAAGGGCGG CAGACGCCCG
TCCGGCAAAG GCGCACCGGG CAAGCATCGC GGTCAGGGCA AAGGCGGCAA TCGTCCGCAG
ACCTCCGACA AGCGCGACAC CAAGCCCAAG ACCTATTCGT CCCGGCCCGA GACGTCGAAA
AAAGTCGATC CCGACAACCC CTTCGCGGTC CTCGCGGCCC TGAAAGACAA GTCATAA
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| Protein sequence | MRDTRTGGRV AAILGPTNTG KTHYAIERML AHRTGVIGLP LRLLAREVYD KVVAIKGPSV
VALVTGEERI VPPRAAYWVC TVEAMPTASG ADFLAVDEIQ LCADPERGHV FTDRLLHARG
LHETLFMGAS TMRNAIAELV PHCEFMHRDR FSQLVYAGSK KMSRIPGRSA IVGFSVENLY
ATAELLRRTK GGAAVVMGAL SPRTRNAQVE LYQNGDVDIL VATDAIGMGL NLDIKHVAFS
GTRKFDGRKM RELWPNELAQ IAGRAGRHTQ DGSFGVTGEA EPFDDGLADA IVNHRFAPVR
KLMWRNSALE FGSAERLIAS LEMRTDDEWL TRAREADDVQ ALKALIARPE VAARLGDARA
VKLLWDVCNI PDFRGISHAE HADLLGRIFE FLHEHRRVPD DWLARQVKRI DRPEGDIDTL
SKRLAYIRTW TYVAQRTGWV DDESHWRGAT RAVEDRLSDA LHQALTLRFV DRRTSVLLRR
LKQRESLVAE VNENGEVSVE GQVLGRIEGF RFRMDESATA DEAKTLQSAA MAALRPEFHL
RADRMYNAPD TEFDLTEQGG LMWGDMAVGK LVKGPEALKP LAEAFVDADA GAEVVQKVQR
RLQHFIDRRI AAQFEPLLAM SRDEAVTGLA RGVAFQLLEG FGIVPRGEIA DDIKALDQDA
RGLLRKHGVR FGQYTIFLPL LLKPAPTRLR LVLWGLAQDF DTFPDSPPPG LVTIPTEEGA
PAGHATMAGY REAGTRAIRV DMLERLADML RGENSRSGFE ASPDMLSISG LTLEQFADLM
GGLGYKGEKA ERPKVKAAKV AEAAKAEEEA KPEEAAPAEE ASAEEAPAEG ALAEPAPAEG
ASEAPAPEAP AEVTPEADAE APPSEPPAPE GPAEMEVYYT FTWAPRGRGS ARPRRQDGAQ
GGARADGEHG KRSDKGGRRP SGKGAPGKHR GQGKGGNRPQ TSDKRDTKPK TYSSRPETSK
KVDPDNPFAV LAALKDKS
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