| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_3261 |
|---|
| Symbol | |
|---|
| ID | 3935734 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Jannaschia sp. CCS1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007802 |
|---|
| Strand | - |
|---|
| Start bp | 3313156 |
|---|
| End bp | 3314010 |
|---|
| Gene Length | 855 bp |
|---|
| Protein Length | 284 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 637905634 |
|---|
| Product | IclR family transcriptional regulator |
|---|
| Protein accession | YP_511203 |
|---|
| Protein GI | 89055752 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1414] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCGATGG CGAGTTCAAG CACACCCCCG GCCTCCGGTC CGTCCCGCCG GGCCCGTGGG
CGTCCACGCG GCTGGGATGA CAAGACCGCA CAGAATACGA TCAAATCGCT GGATCGCGCG
ATGGAAGTGT TTGAACACCT TAGTGCAACG CGCGGCGCAA CGCTGTCGGT TCTGGCCAAG
GACCTCGATC AATCGCCCGC CACCGTTTAC CGGATCCTCG TGACGTTGGA GGGGCGGGGG
TTGGTGGAAT TTGACCCCAC CGCGCAGCAT TGGCATATCG GGGCACGGGC CTTCGTGATC
GGGGCGCGCT ACCTGCGGCG CACTTCGCTG GTCGATCGCG CGCGGCCCGT CATGCGGCGT
CTGATGGAAA TCACCGGAGA GACCGCCAAC CTCGGCGTCG CCCGTGACAC CCATGTGTTG
TTCGTGAGCC AGGTGGAAAC CCACGCCTCC ATCCGGGCCT TCTTTCCGCC CGGGACACTG
TCGCCCATGC ATGCCTCGGG CATCGGCAAG GCGCTTCTGG CGCAGATGAG CGATGATCGC
CTGTCGCGCC TGATCGCAAC GGCCCCGCTG GACCAGTTCA CCTCCCGCAC GCTGACGGAA
CCCGCCACGC TGCGCGCGGA TCTGGAGGCG ACGCGCGAAC GGGGCTATTC CATTGATGAT
GAGGAGAAGA ACGAGGGCAT GAGGTGCATC GCGGCCCCCG TTCTTGATTT CAGTGGAGAG
GCCGTGGCGG GCATCAGTGT GTCCGGTCCG GTCAGCCGCA TCAGCGTCGC CCAGACGGAA
GAGATCGCGC AGGCTGTCAT GGCCGCCGCG GCGGAGTTGT CGACGGCGAT GGGGGCTGAG
AGGCCGCGCA GTTGA
|
|---|
| Protein sequence | MSMASSSTPP ASGPSRRARG RPRGWDDKTA QNTIKSLDRA MEVFEHLSAT RGATLSVLAK
DLDQSPATVY RILVTLEGRG LVEFDPTAQH WHIGARAFVI GARYLRRTSL VDRARPVMRR
LMEITGETAN LGVARDTHVL FVSQVETHAS IRAFFPPGTL SPMHASGIGK ALLAQMSDDR
LSRLIATAPL DQFTSRTLTE PATLRADLEA TRERGYSIDD EEKNEGMRCI AAPVLDFSGE
AVAGISVSGP VSRISVAQTE EIAQAVMAAA AELSTAMGAE RPRS
|
|---|
| |