| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_3164 |
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| Symbol | |
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| ID | 3935635 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | - |
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| Start bp | 3203841 |
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| End bp | 3204245 |
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| Gene Length | 405 bp |
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| Protein Length | 134 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637905535 |
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| Product | methylmalonyl-CoA epimerase |
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| Protein accession | YP_511106 |
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| Protein GI | 89055655 |
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| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
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| COG ID | [COG3185] 4-hydroxyphenylpyruvate dioxygenase and related hemolysins |
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| TIGRFAM ID | [TIGR03081] methylmalonyl-CoA epimerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCGGAC GCCTAAACCA CGTCGCCATC GCCGTACCGG ACCTCGACGC GGCAGCAGCC
CTGTACCGCG ACACCCTGGG CGCCGAGGTG GGCGCCCCCC AGGATGAGCC CGATCACGGC
GTCACCGTCA TCTTCATCAC CCTGCCGAAC ACCAAGATTG AGCTCCTCTA CCCCCTTGGG
GATAACTCGC CCATTGCTGG CTTTTTGGAA AAGAATCCGG CGGGCGGCAT CCATCATATC
TGTTATGAAG TCGAAGATAT CCTAGTTGCG CGCGACAGAC TGAAAGCGTC GGGCGCGCGG
GTGTTGGGGA CAGGCGAGCC CAAGATCGGC GCTCACGGAA AGCCCGTGCT CTTCCTGCAT
CCAAAGGACT TCACCGGCAC TTTGGTCGAG TTGGAGCAGG TCTGA
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| Protein sequence | MIGRLNHVAI AVPDLDAAAA LYRDTLGAEV GAPQDEPDHG VTVIFITLPN TKIELLYPLG
DNSPIAGFLE KNPAGGIHHI CYEVEDILVA RDRLKASGAR VLGTGEPKIG AHGKPVLFLH
PKDFTGTLVE LEQV
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