Gene Jann_3102 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJann_3102 
Symbol 
ID3935573 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJannaschia sp. CCS1 
KingdomBacteria 
Replicon accessionNC_007802 
Strand
Start bp3138705 
End bp3139040 
Gene Length336 bp 
Protein Length111 aa 
Translation table11 
GC content59% 
IMG OID637905473 
ProductMarR family transcriptional regulator 
Protein accessionYP_511044 
Protein GI89055593 
COG category[K] Transcription 
COG ID[COG1733] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.356681 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATGTAA GTCGTGATGC CCCAACGGAT CAGACGCGGT GTGCCGTGGA AGCCACCGTC 
GCCGTGATTG GCGGCAAGTG GAAGCCGATC CTGATGTTTC ACCTTGTGTC CGGCACGAAG
CGGTTTTCCG GACTGAAACG CCTTTTGCCA CAAGCCTTCG ATCGCATGCT GACGCGGTCC
CTTCGGGAGC TGGAACAGGA CGGCTTGGTG AAGAGGGAGG TGTTTGCCGA AGGGCCTGTC
CGTGTCTGCT ATTCCTTGAC GACAGCTGGC GTCTCTCTGG TTCCCGTGCT CACCGCAATG
AGTGATTTGG GGGCGAACAG GGGGATGCCT GAGTAA
 
Protein sequence
MNVSRDAPTD QTRCAVEATV AVIGGKWKPI LMFHLVSGTK RFSGLKRLLP QAFDRMLTRS 
LRELEQDGLV KREVFAEGPV RVCYSLTTAG VSLVPVLTAM SDLGANRGMP E