Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Jann_3092 |
Symbol | |
ID | 3935563 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Jannaschia sp. CCS1 |
Kingdom | Bacteria |
Replicon accession | NC_007802 |
Strand | - |
Start bp | 3127153 |
End bp | 3128130 |
Gene Length | 978 bp |
Protein Length | 325 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637905463 |
Product | inner-membrane translocator |
Protein accession | YP_511034 |
Protein GI | 89055583 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1172] Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.281303 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.348975 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCAGCC CATCGCCGTC CCAAAGCATC TTCACCCGTC TGTTTGGCGG ATCGGGTGTG GGTACAACCG TCCTGATCCT GCTGGTGTTC TACGTCCTTT TGCTGATCGT CTTCTCGTTC CTGTCGCCGT TCTTCATGAC GGTGCGCAAC ATGACATCCA TCAGCTCAAA CATCGCATTG ATCGGGCTTA TGGCGGCGGC GGGCACCCCG TTGATCATCG CCGGGGGTCT GGATCTGTCG GTTGCGGCGG TGGCCGGTCT GACCGGGGTG ATCATCGCAT TGCTGCACGC CGCCGGGCTT CCGATCTGGG TCGCGGTATT GTGTGCCATC GGCGTGGCGG TGGGGATCGG CATCGTGAAC GGCGTGCTGG CCACCTATCT GCGGCTGAAC CCGTTGATCG TCACACTGGC GACAATGTCC ATTGTCAGCG GCGTCTCGTT GATCCTGACC GGAGGCCTGA CCAAGCCGCT TCTGGTGGAT GGATTCAACT GGATTGGACA GGGGCGCGTT CTGGGTATCC CCGTGCCCGC CCTGTTGATG CTGGCGGTCT ATGGTATGCT ATGGCTGGTC CTGCAGAAAA CCCATTTCGG ACGCCACGCC TTTGCCGTCG GGGGCAATCC GGATGCCAGT CGTCTGATCG GCCTGCCGGT CAACCGGACG CAGGTGTCGC TTTACGTGAT GTCGGCTGTA TCGGGTGCCA TTGCAGGCAC GGTCCTTGCG GCCATGTTGG GGGCGGCGGC GCCCAATGCG GCGGGGCCGC ATCTGCTGAC TGTCATCGCC GCGATCATTC TGGGGGGCAC ATCCCTGCAA GGCGGGCGCG GATCCGTGTG GGGTACGCTG GTCGCCGTCC TGATCCTTGG GACGCTCAAC AACGGGCTGA CCCTGATGAA TGTCACCAGC TTCTGGCAGG ATGTGACCCG GGGTGTCGTT CTGATCCTGG CGGTGGGCTT TGACGGCGTG CGACAGCGCA TGGCGTGA
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Protein sequence | MSSPSPSQSI FTRLFGGSGV GTTVLILLVF YVLLLIVFSF LSPFFMTVRN MTSISSNIAL IGLMAAAGTP LIIAGGLDLS VAAVAGLTGV IIALLHAAGL PIWVAVLCAI GVAVGIGIVN GVLATYLRLN PLIVTLATMS IVSGVSLILT GGLTKPLLVD GFNWIGQGRV LGIPVPALLM LAVYGMLWLV LQKTHFGRHA FAVGGNPDAS RLIGLPVNRT QVSLYVMSAV SGAIAGTVLA AMLGAAAPNA AGPHLLTVIA AIILGGTSLQ GGRGSVWGTL VAVLILGTLN NGLTLMNVTS FWQDVTRGVV LILAVGFDGV RQRMA
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