| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_3081 |
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| Symbol | |
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| ID | 3935552 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | - |
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| Start bp | 3114218 |
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| End bp | 3116245 |
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| Gene Length | 2028 bp |
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| Protein Length | 675 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637905452 |
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| Product | dehydrogenase, E1 component |
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| Protein accession | YP_511023 |
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| Protein GI | 89055572 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0022] Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit
[COG1071] Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0845423 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.132557 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTGACA TCTCTGTCCT CAACAATTTG CCGCGCGCCA CGCCCAATGG GCTTGCCCCC
AAAGATCTGC GTGCCGCACT GAAGATGATG TTGCGAATTC GCCGGTTTGA AACCCGCGCA
AAAGAGCTGT TCTTGCAAGG CGTGATCAAG GGAACGGCGC ATTCAAGTGT CGGGCAGGAG
GCCATTGCCG CCGGGGCCTG TGCGGTGCTG GAGCCTGCGG ACTTCATACT GACCCACCAT
CGCGGCCACG GGCATACAAT CGCCAAGGGC GCGGATCTGG GCCGAATGTT TGCGGAACTG
ATGGGGCGTG AAACCGGGTA TTGCGCCGGT CTGGGCGGAT CGATGCATAT CGCGGATTTT
GACCGTGGCA TTCTGGGCGC GAATGGCATT GTCGGGGCCG GGATCGGCCT TGGTACGGGC
GCCGCGCTGG CCGAACAACT GGACGCCACC GGTGCGATCG GGATCAGCTT CTTCGGCGAT
GGCGCGGCCA ACGAGGGGAT CTTTCACGAG GCGATGAACC TTGCCGCAAT CTGGAAGCTG
CCGCTGATCT TCTTTTGCGA GAATAACCAG TACGGTTTGA CCACTCCGAC GACGGCAGTC
ACGGCCGGGC CAAGCATTGC CGCGCGAGGG GATGCTTACG GCGTGCCCAA CGAACAGATC
GACGGCAACG ATCTGCCCGC GGTGCACATG GCCGTGTCGC GGGCGGCGTT GCGGGCGCGG
GCCGGGGACG GGCCTACCCT GATCGAGGCG CTGACGTATC GGTGGGACGA CCATTCGATG
CGTGCCAATC TGCCCGCCTA CCGAAGCGAG GCCGAGGAAG AGGCATGGAA ATCCCAGGAT
CCGATTGTCC GACTTGAGGC CGACATGTCA AAGCTTGGCG AGTTGGACGC GGCAAGCTAC
GCCGCGCTGA ATGATGAGGC CGAAGCGGAC GTGGAGGCTG CCATCGAATG GGCCCGGTCC
CAGGCAGAGC CGGATCTGGC CGGTGCCATG TCGCTTGTCA GCGCCCCCCG GACGGGCGCG
TATCCGGCGC CGCCCGCGGC GGGGTCGCGC AAGATCACCT ACGCCCAAGC GATTACCGAA
GCCTTCGCAC AGCAAATGGC GCGCGATCCA GATCTTCTGA TCCTTGGGGA GGATGTCGGG
CGAACCGGCG GCATTTTTGG CCTGACAAAG GGCCTTTTCG ATACGTTCGG CCCGGATCGT
GTGCGCGACA CGCCGATCTC CGAGGGCGCT ATCGCGACCT GTGGTGTGGG TGCGGCGATG
CGCGGCAAAC GTGTCGTGGT GGAAGCGCAG CTCTGGGATT TCGTGACACT GATGATGGAC
GCCATTGTCA ATCAGGCTGC AAAAGCACGC TTCATGCTCG GGGGGAAAGC AAAGGTGCCC
ATCGTGTTTC GTGGCCCGCA AGGTGCAGGT ATTCGATTGG CCGCACAACA TTGCCAATCG
CTTGAGATGC TCTTTGCCAA TGTCCCCGGG CTGGAAATCT ACGCGCCCTC TACCGCTTAC
GACGCCAAGG GGTTGATGGC AGCCGCGCTC CGCCATGATG GCCCGGTCGT GTTTCTGGAA
CACAAGCTGC TCTATCTGGG GCAGGCGCAG GCGGTGCCTG AGGCCAGCTA TGTGGTGGAG
CCGGGACAGG CGCGTATCCT GCGCGAGGGG TCCGATTGCA CAATCGTTGC GACCCTCGCC
ATGGTCGAGC GCGCTGTGCA GGCGGCCGAC AAGCTGGCCG GCGAGGGGAT CAGGGCCGAG
GTGATTGATC CGCGCACGAT CAAGCCATTC GACATTGACA CGATTGTCGG GAGTGTCCGC
AAAACCAACC GGGCCGTCGT GGTGCACGAA GCGCCGCGTT TCGGCGGATT TGGTGGAGAG
ATTGCCGCTG CCATCACCGA GGCCGCCTTT GACTGGCTTG ACGCGCCGGT CGCGCGGATC
GGCGCGCCGG AAATGCCCGT TCCCTACAAC GACCGGCTGG AACGCCAATA CATGCCCGAT
GCCCGCCGTA TCGCCGAGGC CGTCAGAACC GTCTGCTACA GGAGCTAA
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| Protein sequence | MADISVLNNL PRATPNGLAP KDLRAALKMM LRIRRFETRA KELFLQGVIK GTAHSSVGQE
AIAAGACAVL EPADFILTHH RGHGHTIAKG ADLGRMFAEL MGRETGYCAG LGGSMHIADF
DRGILGANGI VGAGIGLGTG AALAEQLDAT GAIGISFFGD GAANEGIFHE AMNLAAIWKL
PLIFFCENNQ YGLTTPTTAV TAGPSIAARG DAYGVPNEQI DGNDLPAVHM AVSRAALRAR
AGDGPTLIEA LTYRWDDHSM RANLPAYRSE AEEEAWKSQD PIVRLEADMS KLGELDAASY
AALNDEAEAD VEAAIEWARS QAEPDLAGAM SLVSAPRTGA YPAPPAAGSR KITYAQAITE
AFAQQMARDP DLLILGEDVG RTGGIFGLTK GLFDTFGPDR VRDTPISEGA IATCGVGAAM
RGKRVVVEAQ LWDFVTLMMD AIVNQAAKAR FMLGGKAKVP IVFRGPQGAG IRLAAQHCQS
LEMLFANVPG LEIYAPSTAY DAKGLMAAAL RHDGPVVFLE HKLLYLGQAQ AVPEASYVVE
PGQARILREG SDCTIVATLA MVERAVQAAD KLAGEGIRAE VIDPRTIKPF DIDTIVGSVR
KTNRAVVVHE APRFGGFGGE IAAAITEAAF DWLDAPVARI GAPEMPVPYN DRLERQYMPD
ARRIAEAVRT VCYRS
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