| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_3079 |
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| Symbol | |
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| ID | 3935550 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | - |
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| Start bp | 3113027 |
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| End bp | 3113812 |
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| Gene Length | 786 bp |
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| Protein Length | 261 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637905450 |
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| Product | HpcH/HpaI aldolase |
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| Protein accession | YP_511021 |
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| Protein GI | 89055570 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3836] 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.500302 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.0571877 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCGCG ATCTGGGCGC CTTGCTTGCG TCTCCCTCGC GGACCATCGG GACATGGTCA
CAGATTGCCG CGCCTGAGAT GATTGATCTG ATCGGTCTCA ACGGGTTCGA CTTCACCGTA
ATAGACTGTG AACACGGCGT TTTCGGGATG GATGCCGCGG AAAACCTGGC CCGTGCGGCA
GATGCCAACG ACATCGCTGC CGCCGTTCGG GTGCCGCAAA ACGACCCTGT CTTGATTATG
AAAGCCCTTG ATGCCGGTAT TCGTCATGTC GTTGTGCCTA ACCTGTCCAG CGGCGAAGAG
GCCGCGCGCG CTGTGGCTGC CACGCGATTT GCCCCGCACG GCCTGCGCGG GGCGTGCCCC
TGTTGTCGGT CCGGCGGGCA TTTCATTCGA AATTGGCAGG ATTACGTAGT CGAAGAGGAA
GCCCGCGTCG GCGTTATTGG CCTGGTGGAG ACCGCAAACG GGTACCGCAA CATCAAGGAG
ATCTGCGCGA CGCCGGGGCT GCGAGGCCTG ATGTTTGGTC CGTTCGATCT GTCTGTCTCC
ATGGGGTTCA ACGGCGACTG GCGTCACGAC ACGGTGCAGG CCGCGCTGGT CGAGATGGTG
ACATGCGCAC TAGGCGCCGA TCTGGACGTG ATGATGCCGA TATTCTCGGC GGACTCGACG
GAGTGTGAAA CACTGATCGC CGACTGGTCT GAACGGGGTG TGCGCAGCTT TGTCATCGGC
TCTGACAAGA TCCTGATCGC GACAGCCTTT GCGCAATGGA GCGGCGTGGC CAGGTCGGCG
ACGTAA
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| Protein sequence | MTRDLGALLA SPSRTIGTWS QIAAPEMIDL IGLNGFDFTV IDCEHGVFGM DAAENLARAA
DANDIAAAVR VPQNDPVLIM KALDAGIRHV VVPNLSSGEE AARAVAATRF APHGLRGACP
CCRSGGHFIR NWQDYVVEEE ARVGVIGLVE TANGYRNIKE ICATPGLRGL MFGPFDLSVS
MGFNGDWRHD TVQAALVEMV TCALGADLDV MMPIFSADST ECETLIADWS ERGVRSFVIG
SDKILIATAF AQWSGVARSA T
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