| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_3075 |
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| Symbol | |
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| ID | 3935546 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | - |
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| Start bp | 3108364 |
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| End bp | 3109437 |
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| Gene Length | 1074 bp |
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| Protein Length | 357 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637905446 |
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| Product | ABC transporter related |
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| Protein accession | YP_511017 |
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| Protein GI | 89055566 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG3842] ABC-type spermidine/putrescine transport systems, ATPase components |
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| TIGRFAM ID | [TIGR01187] spermidine/putrescine ABC transporter ATP-binding subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.106558 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCATA TCATAAGCAT TCATGCGCTA TCGAAGCACT TTGGTGCAGT GATCGGGGTC
GACGACGTGA CCCTTGATGT GCCCGAGGGC CAGTTCGTGA CGCTGTTGGG GCCGTCGGGC
TGCGGCAAAT CCACTTTGCT GCGGATGATC GGGGGTTTTG AAGATCCAAC GACCGGGACG
ATCCGTCTGG ATGGGCAGGA CGTCACCCAT GTGGCGCCGA ACAAACGGGC GGTGAACATG
GTCTTTCAGG ACTATGCGCT ATTCCCGCAC ATGAGCGTTG GCAAGAATGT CGGCTATGGA
CTGCGCGTCT CGGGCGTTGC GCGGGCCGAT ACCGAACAGC AGGCGCGGGA GGCGCTGATG
CTGGTCGGGC TGGAGGACAA GGTTGACGCG ATGCCGGGTC AACTGTCCGG CGGTCAGCGT
CAGCGGGTCG CATTGGCGCG CGCGTTGGTG CGCCGCCCCA AGGTTCTTTT GTTGGACGAG
CCGCTGTCCG CGCTGGATGC GAACCTGCGT GAAGCCATGC AGGTTGAGCT TCGGCGGCTG
CACCAGCAGA TCGGACTGAC ATTCATCATG GTGACCCATG ATCAGGACGA AGCGCTGGCC
ATGTCCGACC GTGTGATCGT GATGCGCGAT GGGCGGGTGA TGCAGGATGC GTCGCCCGAG
GACTTATATG CCAATCCCGC CTCGCCTTAC GTGGCGGGGT TCGTGGGCAC GACGAACTTC
TTTTCCTCGA AGGCGAAGGA CGGTGCTGTC GCGTATTCGG GCCAAACCCT GCGCTTGCCA
CAGGATCTGG CGAACACATC CCTGACCACC TTTGGCTTCC GTCCCGAAAA GGCCCGCCTG
GTGCCGATTG GCCAGGCGCC GACTGGTCAA GCCCTCACCG GCATCGTGGA AGAGGTGCTG
TTTCACGGCA AAGCGATGCG TGTGCTTGTC ATGGTCGAGG GCAATCACGT TACAGTAGAC
ACGCCGATGT GGTCCGCGCA GGCGCGGGCC GGACTTCCGT CCGTTGGCGA AGAGGCAGCA
ATCGAGATCG CGCCGGATGC GATCATGGCC TTTACGTCCG AGGCCGCAGA ATGA
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| Protein sequence | MTHIISIHAL SKHFGAVIGV DDVTLDVPEG QFVTLLGPSG CGKSTLLRMI GGFEDPTTGT
IRLDGQDVTH VAPNKRAVNM VFQDYALFPH MSVGKNVGYG LRVSGVARAD TEQQAREALM
LVGLEDKVDA MPGQLSGGQR QRVALARALV RRPKVLLLDE PLSALDANLR EAMQVELRRL
HQQIGLTFIM VTHDQDEALA MSDRVIVMRD GRVMQDASPE DLYANPASPY VAGFVGTTNF
FSSKAKDGAV AYSGQTLRLP QDLANTSLTT FGFRPEKARL VPIGQAPTGQ ALTGIVEEVL
FHGKAMRVLV MVEGNHVTVD TPMWSAQARA GLPSVGEEAA IEIAPDAIMA FTSEAAE
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