Gene Jann_3000 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJann_3000 
SymbolglpX 
ID3935470 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJannaschia sp. CCS1 
KingdomBacteria 
Replicon accessionNC_007802 
Strand
Start bp3020195 
End bp3021157 
Gene Length963 bp 
Protein Length320 aa 
Translation table11 
GC content64% 
IMG OID637905370 
Productfructose 1,6-bisphosphatase II 
Protein accessionYP_510942 
Protein GI89055491 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1494] Fructose-1,6-bisphosphatase/sedoheptulose 1,7-bisphosphatase and related proteins 
TIGRFAM ID[TIGR00330] fructose-1,6-bisphosphatase, class II 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.231089 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.455198 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCACGA CCGATTTCAA CGACCGCAAT CTTTCCCTCG CTTTGGCCCG CGTATCCGAG 
CGGGCGGCCA TCGCATCGGC CCTCTGGATC GGGCGCGGAG ATGAGAAGGC CGCGGATCAG
GCGGCCGTGA ACGCGATGCG CGAGCAGCTC AACAAACTGG ACATCAAGGG CGTAGTCGTC
ATCGGAGAAG GCGAGCGTGA CGAGGCCCCG ATGCTCTTCA TTGGCGAGGA AGTGGGCAGC
GGCAAAGGCC CCGACGTGGA CATCGCGCTC GACCCGCTGG AAGGCACGAC CCTGACTGCC
AAGGACATGC CCAACGCGCT GACGGTCATT GCGATGGGCC CGCGTGGGTC GATGCTGCAC
GCGCCGGATG TCTATATGGA AAAGCTCGCG ATTGGTCCGG GCTTTCCCGA AGGTATCGTC
TCGCTCGACC AGACCCCGGC CGAACGGGTA CGCCTGCTGG CGGCCGCCAA GCAATGCACG
ACGGCCGACA TCACCGTCTG CGTGTTGGAT CGTCCGCGCC ATGAGGATAT GATCGCGGAA
TTGCGCAAGA CCGGGGCGGC GATCCGGCTG ATCACCGACG GCGACGTGGC GGGCGTGATA
CACTGTGCTG AGTCCGAGAC GACGGGCATC GACATGTATA TGGGCCTCGG CGGCGCGCCT
GAAGGGGTGT TGGCGGCGGC GGCCCTGAAA TGCATGGGCG GCCAGATGTG GGGCCGCCTG
ATGTTCCGCA ATGACGACGA AAAAGGCCGC GCGGCAAAGG CCGGGATCGA GGATCTGGAC
CGCATCTATT CCCGCGACGA TATGGTGACG GAAGATGTGA TCTTTGCGGC GACCGGCGTC
ACGGACGGCT CCATCCTGCC GGGCATCAAG CGCGAGCCGG GGCATCTGAC AACTGAGACG
ATCCTGATGC GGTCAAAGAC AGGCTCGGTG CGGCGGATGA GCTATCGCAA TCCGAAAAGC
TGA
 
Protein sequence
MPTTDFNDRN LSLALARVSE RAAIASALWI GRGDEKAADQ AAVNAMREQL NKLDIKGVVV 
IGEGERDEAP MLFIGEEVGS GKGPDVDIAL DPLEGTTLTA KDMPNALTVI AMGPRGSMLH
APDVYMEKLA IGPGFPEGIV SLDQTPAERV RLLAAAKQCT TADITVCVLD RPRHEDMIAE
LRKTGAAIRL ITDGDVAGVI HCAESETTGI DMYMGLGGAP EGVLAAAALK CMGGQMWGRL
MFRNDDEKGR AAKAGIEDLD RIYSRDDMVT EDVIFAATGV TDGSILPGIK REPGHLTTET
ILMRSKTGSV RRMSYRNPKS