Gene Jann_2992 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJann_2992 
Symbol 
ID3935462 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJannaschia sp. CCS1 
KingdomBacteria 
Replicon accessionNC_007802 
Strand
Start bp3013394 
End bp3013669 
Gene Length276 bp 
Protein Length91 aa 
Translation table11 
GC content54% 
IMG OID637905362 
Producthypothetical protein 
Protein accessionYP_510934 
Protein GI89055483 
COG category[S] Function unknown 
COG ID[COG4298] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.488383 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.559435 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGATC GTCACCATAA TACACTGATT ATGAACCTTA ATTTTCTGGG CGTTGTCGTC 
GCCTACGCCC TTCTGGCCAT GTCATTGTGG CTGTCCGTGG ACGTGCCCCT GGCGACCAAG
GGCTACTGGG GCATGGGCGT TTTGCTGCTG ACCCTGAGCC TGATCAACGT GGTGAAATAC
CGCTTCGATA TGCGCTTCAG CGATGACCGG TTGCGCAAGA TTGAGGATGC GAAAAACGAG
AAGCTGCTGG AGGACGCGTT GAACGAGGAG GTCTGA
 
Protein sequence
MSDRHHNTLI MNLNFLGVVV AYALLAMSLW LSVDVPLATK GYWGMGVLLL TLSLINVVKY 
RFDMRFSDDR LRKIEDAKNE KLLEDALNEE V