Gene Jann_2968 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJann_2968 
Symbol 
ID3935438 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJannaschia sp. CCS1 
KingdomBacteria 
Replicon accessionNC_007802 
Strand
Start bp2987024 
End bp2987389 
Gene Length366 bp 
Protein Length121 aa 
Translation table11 
GC content61% 
IMG OID637905338 
ProductMerR family transcriptional regulator 
Protein accessionYP_510910 
Protein GI89055459 
COG category[K] Transcription 
COG ID[COG0789] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.151123 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.0469101 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGAGG ACAGGCTTGA TTTCAAACAG ATGTGCGCGC GCTTCGACGT AACGCCCCGC 
ACCCTGCGTC ACTACGAATA TATAGAATTG CTCGCCCCCA TGCGCGAAGG CCGCGCGCGG
TATTACGGCC CAAAGGAAGT GGCGCGCATG ACATTGATCC TGCGCGGGCG ACGGTTTGGA
TTTTCGCTGG AAGAGATCCG GCAATGGCTG GAGATCTATG ATCGCGGTGA CGGGTGGGAG
GGTCAGCGCG AGGTCTGGAT CGCCCGGGCC GACGCCCAAT TGGAAGAACT TCAGGCGCGG
CGGGTAGAGC TTGACGAGAT CATTGCGGAG CTGAAATCGC TGCGGGATGC GTCCGCCGCG
ATCTGA
 
Protein sequence
MSEDRLDFKQ MCARFDVTPR TLRHYEYIEL LAPMREGRAR YYGPKEVARM TLILRGRRFG 
FSLEEIRQWL EIYDRGDGWE GQREVWIARA DAQLEELQAR RVELDEIIAE LKSLRDASAA
I