| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_2943 |
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| Symbol | |
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| ID | 3935413 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | + |
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| Start bp | 2965816 |
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| End bp | 2966892 |
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| Gene Length | 1077 bp |
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| Protein Length | 358 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637905313 |
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| Product | TRAP dicarboxylate transporter- DctP subunit |
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| Protein accession | YP_510885 |
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| Protein GI | 89055434 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1638] TRAP-type C4-dicarboxylate transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.00000177028 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.0000105865 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGGTATCAA AAGCAATCTT GCGGAGCACG GCGCTGGCCG TCACCACATT GTCACTGGGC
GCGGGTGCCG CACTGGCGGA AGACTTCACG CTGCGGATCG GCGCGGGCCA CCCCAACGGT
CCGGCGGTTT ATGTCGCTGA CATGGCGGAC TTTTTCGTGC CGGAAGTCGT CCGCCGCGTC
GCAGAAGAGA CCGAGCACAC GATCACCTTC GTGGAAGGCT ATGGCGGGGC AATCGCGGGC
GTGGCCGAGA CGCTGGAATC AGTGGAAAAC GGCATCCTCG ACATTGGCGG CTATTGCATG
TGTTTTGAGC CGGCAAAGCT GTTCCTGCAC AACTTCCCCT ATTACGCACC GTTCGGCCCC
CAGGATTCCG ATCAGCAGAT GGCCGCGACC CGCGCCGTCT ACGATCAGAT CCCGTGGCTG
GAAGAGCAAT TCACGTCTGA ATACGGTCAG GTCCTTCTGG GGCTGCATGG CTGGGACAAT
TATCACCTCG GCACCACGGA CCCGTGGGAG ACCGTTGAAG ACCTGGCTGG CGTGAAGATC
GGCGGCGCCG GTCCCAACCT GCCGTGGCTG GAATTCGCGG GCGCCACGCC TGTTCAGTCC
ACCCTGCCCG ACGGGTATCT GTCGTTGCAG ACGGGCGTCT ACAATGGCTG GCTGATGTTC
CCGTCGGCCT ACCTTGGCTT CCGGTTCTAT GAGCCCGCGC CCTATTACAC GCTGATCGGG
TTTGGCGCGA TGGGGGTGAA CGCGCTGACA ATGAACGAGC GGAGCCTCAA CAACCTGCCG
GAAGATGTGC AGGCGATCAT CCTTGAGGTC GGGGCCGCCT ATGAGGCGCA GGCCGGTGGC
TCGCTCAACG CGCGTCAGGT CTCGGGTCTG TCGGGCCTGG AAGAGGCCGG GGCCACGATC
TCGGAAATCT CGCCAGACGT GCGCAGCGGA TGGGCCGAGT CCCTGGCCAC GTTCCCGGGC
CAGCAAGCCG CAGAGGCCGA TGGCCGTGGC ATGCCGGGCA CGGAGGTGAT GCAGGCCTAC
CTCGATGCGG TGGCCGCCAC CGATTACGAG TGGCCGTTCG TCTACTCCCT CAACTAA
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| Protein sequence | MVSKAILRST ALAVTTLSLG AGAALAEDFT LRIGAGHPNG PAVYVADMAD FFVPEVVRRV
AEETEHTITF VEGYGGAIAG VAETLESVEN GILDIGGYCM CFEPAKLFLH NFPYYAPFGP
QDSDQQMAAT RAVYDQIPWL EEQFTSEYGQ VLLGLHGWDN YHLGTTDPWE TVEDLAGVKI
GGAGPNLPWL EFAGATPVQS TLPDGYLSLQ TGVYNGWLMF PSAYLGFRFY EPAPYYTLIG
FGAMGVNALT MNERSLNNLP EDVQAIILEV GAAYEAQAGG SLNARQVSGL SGLEEAGATI
SEISPDVRSG WAESLATFPG QQAAEADGRG MPGTEVMQAY LDAVAATDYE WPFVYSLN
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