Gene Jann_2916 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJann_2916 
Symbol 
ID3935385 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJannaschia sp. CCS1 
KingdomBacteria 
Replicon accessionNC_007802 
Strand
Start bp2938286 
End bp2939020 
Gene Length735 bp 
Protein Length244 aa 
Translation table11 
GC content62% 
IMG OID637905286 
Productglutamine amidotransferase class-I 
Protein accessionYP_510858 
Protein GI89055407 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0518] GMP synthase - Glutamine amidotransferase domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.186988 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGAAAGG GAAGCGAAAA GATGCACCTC GCCACGTTGA TGACCAACAC GGATGACAGC 
GTATTCGCGC AGGCCCATCC CAAGGATGGG GAGAAGTTTG CGGCCCTGAT CCACAGCGTT
CGACCGGGCT GGCAGGTGAC GTCATTTGAT GTGAAAGATG GCGTTTTTCC AAAAGATATC
AACGCGTTCG ATGGCGTCAT GATCACGGGT AGCCCGGCGT CTGTTCTGGA CGACGCGCCC
TGGGTCGCAC GGCTGTTGCA GGTGATCCGG GAGGCATACG CCGCCGAAAC GCCGTTGTTT
GGCGCCTGCT ATGGCCACCA GGCCATTGCC CTGGCGTTGG GCGGCGAGAT CGGGCCAAAC
CCGGACGGCT GGGTGTTCGG GCTGACCCAC TCCACCGTCA CGGAAACCGC CCCTTGGATG
GAGGGGTTGC CGCGACAATT CCCCCAATAT GGGGCCCATA TGGAGGCGGT GGTGCGCCTG
CCAGAGGGCG CGCGGGTCCT GTCCACCTCT GACGCCTGTG AGATCACCGG CTTTCGGATC
GGCGACACCG TCTACACGAC ACAGAACCAC CCAGAAATGA CGCCCCAGTT CATCGCGGCG
CTGGTCGCGG AATACCAAGA CAAACTGCCC GACGGGGTGG GGGCAGCCGC GGTGGCCTCT
CTCACGCAGG ACGTTGACAT GGCGATTTAT GGCGAAACCA TCGCGCGGTT CTTTGAGGGC
GCGTCAGCCG ACTGA
 
Protein sequence
MRKGSEKMHL ATLMTNTDDS VFAQAHPKDG EKFAALIHSV RPGWQVTSFD VKDGVFPKDI 
NAFDGVMITG SPASVLDDAP WVARLLQVIR EAYAAETPLF GACYGHQAIA LALGGEIGPN
PDGWVFGLTH STVTETAPWM EGLPRQFPQY GAHMEAVVRL PEGARVLSTS DACEITGFRI
GDTVYTTQNH PEMTPQFIAA LVAEYQDKLP DGVGAAAVAS LTQDVDMAIY GETIARFFEG
ASAD