Gene Jann_2875 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJann_2875 
Symbol 
ID3935342 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJannaschia sp. CCS1 
KingdomBacteria 
Replicon accessionNC_007802 
Strand
Start bp2895191 
End bp2895592 
Gene Length402 bp 
Protein Length133 aa 
Translation table11 
GC content65% 
IMG OID637905243 
Producthypothetical protein 
Protein accessionYP_510817 
Protein GI89055366 
COG category 
COG ID 
TIGRFAM ID[TIGR02096] conserved hypothetical protein, steroid delta-isomerase-related 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.191047 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACACGC ACGCTCTCAT CACCCGCTAT TACGCCGCCT TCAATGCCGC CGACCCCGAC 
GCCATGATCG CCTGCCTTGC GCCCGATGTC GCGCACCACG TGAACGAGGG GGACATCCGC
ATCGGCACCG AGGCGTTCCG CGCCTTTAGC GCCCATATGA CCCGCTGCTA CCGGGAGGAG
CTGACCGACA TCACCATCAT GGCCACGCCC GACGGCACCC GTGCGGCGGC GGAGTTCACG
GTCAATGGCA CTTATCTGCA CACCGACGAC GGCCTGCCCG AGGCGCGGGG CCAGACCTAC
AGGCTGCCCG CAGGCGGGTT TTTCAGCGTG GAAGACGGCA GGATCACCCG CGTCGTGACC
TATTACAACC TGTCCGATTG GATGGCCCAG GTCTCCGCAT GA
 
Protein sequence
MDTHALITRY YAAFNAADPD AMIACLAPDV AHHVNEGDIR IGTEAFRAFS AHMTRCYREE 
LTDITIMATP DGTRAAAEFT VNGTYLHTDD GLPEARGQTY RLPAGGFFSV EDGRITRVVT
YYNLSDWMAQ VSA