Gene Jann_2871 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJann_2871 
Symbol 
ID3935338 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJannaschia sp. CCS1 
KingdomBacteria 
Replicon accessionNC_007802 
Strand
Start bp2892891 
End bp2893439 
Gene Length549 bp 
Protein Length182 aa 
Translation table11 
GC content62% 
IMG OID637905239 
Producthypothetical protein 
Protein accessionYP_510813 
Protein GI89055362 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0703409 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGACCGAGC GGACCATCAC CACGCCCAAC ATGTCGGACG CGGTCGTGGC CTATGCCGCG 
ACCCTGGGCG ATGGCGTGGC CGAACTGGTC AATGTCTTGC CCACGGACGG CGCGGTGGAA
GATCAGCCGT TCTACAACGT CATCATGTCG GGTGCGACGC CCGTGTTCGG CTGGCTGATG
TGGGAGCTGA CGGGATATTG GCTGGAAGCG CAACGCCACG CGGTGATCTC TCGCGATGGG
GCGCTTGTTG ACATCACCCC TCCGATTGAT GGCGAAACGC AGGTTCTGTT CATCCGCGAC
AGCGCCTGGG CGTTCGATTA CCTCAACTCC AAACCCACCC GGAAGGCGCA GCGCCACCTG
CTGACGGATG ACGCCGACGT GGTGAAATGG GCCAGGCTGG CCGATGATTT CGACCTGTTC
AAGTTCCGTC ACACCCAGTT CAAGGGCGAA AAGTCTGAAT TCGTGATCCC CGAGGGCAAG
GACCACCGCC GGATGGAACG GATGCAGCTC GATTACAACG CCGCCGCGCG TGTGGCGCTT
GCGAAATGA
 
Protein sequence
MTERTITTPN MSDAVVAYAA TLGDGVAELV NVLPTDGAVE DQPFYNVIMS GATPVFGWLM 
WELTGYWLEA QRHAVISRDG ALVDITPPID GETQVLFIRD SAWAFDYLNS KPTRKAQRHL
LTDDADVVKW ARLADDFDLF KFRHTQFKGE KSEFVIPEGK DHRRMERMQL DYNAAARVAL
AK