Gene Jann_2858 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJann_2858 
Symbol 
ID3935324 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJannaschia sp. CCS1 
KingdomBacteria 
Replicon accessionNC_007802 
Strand
Start bp2877976 
End bp2879484 
Gene Length1509 bp 
Protein Length502 aa 
Translation table11 
GC content60% 
IMG OID637905225 
ProductDNA-cytosine methyltransferase 
Protein accessionYP_510800 
Protein GI89055349 
COG category[L] Replication, recombination and repair 
COG ID[COG0270] Site-specific DNA methylase 
TIGRFAM ID[TIGR00675] DNA-methyltransferase (dcm) 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.568201 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACGGAA GCTTTGGCAT TATCGACCTC TTCGCTGGCC CAGGCGGCCT TGCGGAGGGG 
TTCTCCGCAG CAGGCCGCGA GACGGATACA CGCATGAAGA TCCGCCTCTC CATCGAGAAG
GAGGCGACGG AGGTGCGCAC ACTTCGGCTG CGCGCATTCC TGCGTGGGTT CGATGGTGGC
TTCCCGACGG AATACTACGC GGCACTCAAC GCTAGCGAAC CGCTACCTGA CTGGTCGGAG
CTTTTTCCCG CCCGCTGGGC TGACGCCTGC AAGGAGGCGT GGCAAATGGA GTTGGGGCAG
CCCGGTGTGT TCGAGGTGAT CGCGAACGTC CTCGATCGGA CGCGCGAGGA ACATGATGGT
AACACCATCC TCATCGGCGG CCCCCCGTGC CAAGCCTACA GTCTGGCTGG ACGTGCGAGA
AACAAAGGTG TTGCGGACTA CGTGGCAGAG AAGGATTCGA GGCATTTCCT CTACAGAGAG
TACGTAGAGA TTCTGAAGCG GCTAAGGCCC GCCGTCTTCG TCATGGAGAA CGTCAAGGGC
ATGCTGTCCA GCAAGGTGAA TGGCGGCGAG ATCTTCGAGC GCGTCCTTGA CGACCTACGC
AACGCAGGTG ACGGCTATAC GCTCGTGCCT TTGTCTGCTC AGCGCAACCG TGAACATTTA
GCGGCCCGGG ACTTCATTGT ACGCGCCGAG GAACACGGTG TCCCGCAGGC GAGGCATCGA
GTGTTCGTCG TCGGCATACG CAATGATCTG CCGACGCCGG AAGGCGACAT GCCCCTCATG
CCAGCCGTAG ATCAGAACTG CCGCGCGGAT GTACATTCCG TTCTGGGCAG CCTGCCTGCA
CTTCGCAGCG GCCTGAGCCG TCAGCGAGAC AATCCCGCAG CTTGGCGCAA AGTCGTACTT
GAACACGCCA AACGTCTCAT CGCCAGCAAG AAGGTGGATT CCGAACTGCG CCAGTATCTT
GCAGAGCTGA AGAAAAGCAG TTTGGCGCGT GCATTCGAGC GTTGCCAGTC GACGAGGTCG
TGTGATGAGA GCGGGATGCC TCCCCAGCTT GCCGAATGGT TGATCGATCC CGCTCTGCAG
CGGATCAGCG GACACGAGAC CCGTGCGCAT ATCGCCGCGG ATCTAGGCCG ATATCTTTTC
GTCTCGGCCT TTGGACGTGA GTACGGCCGA TCGCCCAAGC TCTCCGAATT TCCCGACTAT
CTGCTACCTG CTCACCGAAA TCGCTATAGC GGAGCCTTCG CTGACAGGTT CCGGGTGCAG
ATAGCCGAAC GTCCCTCCAG CACGGTCACT AGCCACATCT CGAAGGATGG CCACTATTTC
ATCCATCCGG ATCCGACTCA GGTCCGTTCA CTAACAGTTC GCGAGGCCGC GCGCCTCCAG
ACCTTCCCGG ACAACTACGT CTTTTGCGGA AACAGGACAC AGCAATATCA TCAGGTCGGA
AACGCGGTTC CTCCGTTCCT AGCGCTACGG ATCGCACGTG TGATCCGAGA CATTATGGGG
CGCTTCTGA
 
Protein sequence
MDGSFGIIDL FAGPGGLAEG FSAAGRETDT RMKIRLSIEK EATEVRTLRL RAFLRGFDGG 
FPTEYYAALN ASEPLPDWSE LFPARWADAC KEAWQMELGQ PGVFEVIANV LDRTREEHDG
NTILIGGPPC QAYSLAGRAR NKGVADYVAE KDSRHFLYRE YVEILKRLRP AVFVMENVKG
MLSSKVNGGE IFERVLDDLR NAGDGYTLVP LSAQRNREHL AARDFIVRAE EHGVPQARHR
VFVVGIRNDL PTPEGDMPLM PAVDQNCRAD VHSVLGSLPA LRSGLSRQRD NPAAWRKVVL
EHAKRLIASK KVDSELRQYL AELKKSSLAR AFERCQSTRS CDESGMPPQL AEWLIDPALQ
RISGHETRAH IAADLGRYLF VSAFGREYGR SPKLSEFPDY LLPAHRNRYS GAFADRFRVQ
IAERPSSTVT SHISKDGHYF IHPDPTQVRS LTVREAARLQ TFPDNYVFCG NRTQQYHQVG
NAVPPFLALR IARVIRDIMG RF