| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_2778 |
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| Symbol | |
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| ID | 3935242 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | + |
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| Start bp | 2794615 |
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| End bp | 2795769 |
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| Gene Length | 1155 bp |
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| Protein Length | 384 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637905143 |
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| Product | FMN-dependent alpha-hydroxy acid dehydrogenase |
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| Protein accession | YP_510720 |
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| Protein GI | 89055269 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1304] L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.985117 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATTTGC ACAGCCGATA CCCCGCGTTG GCGGATCTTC GCGCGCGCGC AAGGCGGCGA
ATTCCGCATT TTGTGTGGGA ATACCTGGAC TCTGCAACCG GTCTGGAGGC TGGGGCAGCT
CGCAATCGCG CCGCGTTGGA GGCCGTGTTG TTCCGACCGG CCGCACTGTT GGGCGAGGTA
TCGCCGGATC TTGGATGTAC GTTTCTGGGG CGCGACTATC CGGTCCCGTT CGGGATCGCA
CCACTGGGCA TGTCTGGGCT CATCTGGCCC GGAGCGGAGC GATTTCTGGC CCGCCATAGC
GCGCAGACTG GCATCCCCTA TGGCTTGTCG ACGGTCGCGA CCGTGCTGCC AGAGACGTTG
GCAGCGGATA TCGGCGATCA GGGATGGTTT CAGATGTATC CGCCGAAATC ACCGGAGGTG
CGCGACGATA TGCTGGCCCG CGCCAGGGCA GCGGGCTTTC ATACCTTGGT TTTGACGGTG
GATGTGCCCG CCGCCTCTCG CAGAGAGCGG CAAACGCGGG GCGGATTGGT GCAGCCCCCA
CGCCTGACGC CGCGCCTATT GGCGCAGGTC GCGACATGTC CCACCTGGGC GCGGGGGATC
GCGGACACCG GGATGCCAAG GATGCGGTTG ATGGACAGCT ATGCCGAAGA TCTGGCCGTC
AATCTGACAG GCGGCCCCCT GCCCTCGACC GCCCATGTCG GCTACCTGCT GCGCGCCGCA
CCCGATTGGG AATACGTCGC CGCATTGAGG GACCGGTGGG AGAGTGCGTT CGTCCTGAAA
GGCGTGTGCG AGCCGGACGT CGCCGCACGG GCGCAGCAGG AGGGTGTGGA TGCCATCTGG
GTCTCAACCC ATGCGGGGCG GCAGTTTGAC GGCGCTCCGG GTGCCGCGGC GATGTTGCCG
GGGATCCGGG CCGCGACGGA CCTGCCCATT GTGTTCGACA GCGGTGTGGA AGGCGGGCTG
GATGTGCTGC GCGCGTTGGC GCTGGGGGCG GATTTCGTCA TGATGGGCCG CGCCTGGCAC
TACGCTCTGG GTGCTTTGGG AGCTGAGGGG CCGGCCCACT GGCACGACGT TCTGGTGCGC
GACATGGCCA GCAACATGGC CCAGATCGGG GCGCGCACGC TTGCCGATCT GCCCGGTCGG
CTGGTTCGGG ATTAA
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| Protein sequence | MDLHSRYPAL ADLRARARRR IPHFVWEYLD SATGLEAGAA RNRAALEAVL FRPAALLGEV
SPDLGCTFLG RDYPVPFGIA PLGMSGLIWP GAERFLARHS AQTGIPYGLS TVATVLPETL
AADIGDQGWF QMYPPKSPEV RDDMLARARA AGFHTLVLTV DVPAASRRER QTRGGLVQPP
RLTPRLLAQV ATCPTWARGI ADTGMPRMRL MDSYAEDLAV NLTGGPLPST AHVGYLLRAA
PDWEYVAALR DRWESAFVLK GVCEPDVAAR AQQEGVDAIW VSTHAGRQFD GAPGAAAMLP
GIRAATDLPI VFDSGVEGGL DVLRALALGA DFVMMGRAWH YALGALGAEG PAHWHDVLVR
DMASNMAQIG ARTLADLPGR LVRD
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