| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_2749 |
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| Symbol | lpxC |
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| ID | 3935213 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | - |
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| Start bp | 2764357 |
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| End bp | 2765274 |
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| Gene Length | 918 bp |
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| Protein Length | 305 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637905114 |
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| Product | UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase |
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| Protein accession | YP_510691 |
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| Protein GI | 89055240 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0774] UDP-3-O-acyl-N-acetylglucosamine deacetylase |
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| TIGRFAM ID | [TIGR00325] UDP-3-0-acyl N-acetylglucosamine deacetylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.141831 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGGCAA CTCTTCGAAA GACAGCAACG TTCACGGGCG TGGGCCTTCA TACGGGCCGG
TTGACCCGCG TCAGTATTTT GCCCCAAGCC GCCAATGTTG GCATCTGGTT CCGTCGAACT
GATCTGGATG ATGCCGCGAT GATCCCCGCC CGCTATGACC TCGTGCCCCA AAGTCGGCTT
TGCACCAAAT TGGTGGCGGA AGACGGGACC GAGGTGTCCA CCATTGAACA CATCATGGCT
GCGCTGATTG GCTCTGGCAT CCACAACGCC CTGATCGAAG TGGATGGGCC GGAGTTGCCC
ATCCTGGACG GCTCCGCCGC GCCATTCGTG CGCGCGATCC TGGATGCTGG CATCCAGCGG
CAGGCTGCCC CGATCCATGC GTTTGAAATC CGCAAGACTG TGCGCGCCGA AGATGGCGAT
GCCTGGGCGG AGCTTAGCCC GTCCAAAAGC CTTGAGATGG ATTACACGAT CGATTTTGCG
GATAAGGCCA TCGGCTACCA GCGCCGTATC GCCAACCTCG CCAATGGGCG CTTCGTGCGC
GAGCTGTGCG ATAGCCGTAC TTTCTGCCGC CGCTCGGACG TTGAGATGAT GCACGAAGCG
GGCTTGGCCC TGGGCGGCAC CTATGACAAC GCTGTTGTCG TTGATGGCGA CGACGTCCTC
AGCCCCGGTG GTTTCCGCCA CGCTGATGAG GCCGTGCGCC ATAAGATGCT GGACGCGTTG
GGAGATTTGG CCCTGGCCGG TGCTCCGATC CTTGGCTGCT ACACCGGGTT CCGGGCCGGG
CATATGGTCA CGAACCAGCT TCTCCGGACC CTGTTCGCGA CCCCTGGTGC TGTGCGGCTG
GTGGAATGCA ACGATGATCA GGCCGCTGCC TTGCCGGGCG TGGGTGTCAA AACAGCCGAC
CTCGCCTACG TGGCCTGA
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| Protein sequence | MQATLRKTAT FTGVGLHTGR LTRVSILPQA ANVGIWFRRT DLDDAAMIPA RYDLVPQSRL
CTKLVAEDGT EVSTIEHIMA ALIGSGIHNA LIEVDGPELP ILDGSAAPFV RAILDAGIQR
QAAPIHAFEI RKTVRAEDGD AWAELSPSKS LEMDYTIDFA DKAIGYQRRI ANLANGRFVR
ELCDSRTFCR RSDVEMMHEA GLALGGTYDN AVVVDGDDVL SPGGFRHADE AVRHKMLDAL
GDLALAGAPI LGCYTGFRAG HMVTNQLLRT LFATPGAVRL VECNDDQAAA LPGVGVKTAD
LAYVA
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