| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_2726 |
|---|
| Symbol | |
|---|
| ID | 3935190 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Jannaschia sp. CCS1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007802 |
|---|
| Strand | - |
|---|
| Start bp | 2737445 |
|---|
| End bp | 2738455 |
|---|
| Gene Length | 1011 bp |
|---|
| Protein Length | 336 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637905091 |
|---|
| Product | dihydropteroate synthase |
|---|
| Protein accession | YP_510668 |
|---|
| Protein GI | 89055217 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0294] Dihydropteroate synthase and related enzymes |
|---|
| TIGRFAM ID | [TIGR01496] dihydropteroate synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCAGTT ATTGGCGCGC CATCCCAAGC CTTGATTCGG CCCGTCCGCC CGGAGCCTTG
CCGCTGGCAG GCGGATGGGC GTGGTTTGAT CGCCTGGAGC GCCTGAACCG TAACGGCCCG
TCCGAGGTCG TTGCCGCGAC GGAAGCGCCC AAGGATGTCT TGCGAAGACT ATGCGCACCC
CGCGCCACCC TTGCGGGGGT GTCGCTGGAC AGGCCGCGTT TGATGGGGAT CCTGAACACA
ACGCCAGACA GCTTCTCAGA TGGTGGGCGT TTTGATGCCA TGCCGCAGGC TGTTGAGCAC
GCCCGTGCCA TGGTCCGCGA CGGGGCTGAT CTTATTGATA TCGGAGGAGA ATCCACGCGC
CCCGGTGCGT CAGAGATCCC AGCTGACGTG GAGATTGCCC GCACAGCACC GGTGATTTCA
GCTCTTCGGG GGGACGGGAT CGCGATCAGT CTCGATACCC GCAAAGCCGC CGTGGCAGAG
GCCGGATTGG CCGCAGGCGC AGCGATCCTG AACGATGTTT CCGGCCTGCG ATTTGACGCG
CGTCTTGCCG ACGTGGCTGC ACAGCATGGT GCACCGCTGG TCCTGATGCA CTCGATTGCC
ACGCCCCAAA CCATGCAGGC CGAGGCGCCG ACGGCCTATT CCGATGTTCT CCTGGACGTC
TATGATGGGT TGGAGGCTGC CATCGCGCAG GCCCGGGCAG TCGGTGTGCG TCGGGACCAG
ATCATCGTCG ACCCCGGGAT TGGCTTTGGA AAGACGCAAG ACCAGAACCT TGATCTGATC
CGGCGCGTCT CCCTGTTTCA CAGTCTCGGC TGCGGTATTC TGCTTGGAGT GTCCCGCAAG
GGGTTCATCG GAACGCTCGG GTCCGAGCCG GACGCCGCGA GGAGGGGCCC CGGGTCGGCG
GCCATCGGCC TATGGGCATT GGGGCAGGGC GTTCAACTTT TGCGCGTCCA TGATATAGCG
TTGCATAGAC AGGCGGTGGC CCTTTGGTGG GCTACTCACA ACGCATTGTA A
|
|---|
| Protein sequence | MTSYWRAIPS LDSARPPGAL PLAGGWAWFD RLERLNRNGP SEVVAATEAP KDVLRRLCAP
RATLAGVSLD RPRLMGILNT TPDSFSDGGR FDAMPQAVEH ARAMVRDGAD LIDIGGESTR
PGASEIPADV EIARTAPVIS ALRGDGIAIS LDTRKAAVAE AGLAAGAAIL NDVSGLRFDA
RLADVAAQHG APLVLMHSIA TPQTMQAEAP TAYSDVLLDV YDGLEAAIAQ ARAVGVRRDQ
IIVDPGIGFG KTQDQNLDLI RRVSLFHSLG CGILLGVSRK GFIGTLGSEP DAARRGPGSA
AIGLWALGQG VQLLRVHDIA LHRQAVALWW ATHNAL
|
|---|
| |