| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_2647 |
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| Symbol | |
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| ID | 3935111 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | + |
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| Start bp | 2661960 |
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| End bp | 2662595 |
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| Gene Length | 636 bp |
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| Protein Length | 211 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637905012 |
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| Product | cytochrome c biogenesis protein CcmA |
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| Protein accession | YP_510589 |
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| Protein GI | 89055138 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG4133] ABC-type transport system involved in cytochrome c biogenesis, ATPase component |
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| TIGRFAM ID | [TIGR01189] heme ABC exporter, ATP-binding protein CcmA |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.122197 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0114626 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGTCCTGA CCGTCACTGA TCTCGCCTGC GCCCGTGGGC CCGCGCAAGT CCTTTCGGGC
GTTTCATTTT CCGTGTCGGC GGGTGAGGCG CTGATCCTGC GCGGCCCAAA TGGCGCGGGC
AAGACGACAC TCCTGCGGAC GTTGGCGGGG CTGACCCCGC CTCTCGCCGG GACGATATCC
CACGCCGAGG ACGCCATCGC CTACGCCGCC CATGCCGATG GGCTGAAAGC GCAACTCACC
GTGGCTGAGA ACCTCACCTT CTGGGCGACG ATCTTCGGCA CCCTGGATAT TGCCCCCGCC
ATCGCGGCCT TTGCCCTCGC CCCCCTCGCC GACCGCCCCG CCGGGGAGCT TTCTGCCGGA
CAAAAACGCC GCCTGTCTCT GGCGCGGCTT CTGGTGACGG GCCGTCCCAT CTGGGCGCTG
GATGAACCGA CCGTGTCGCT CGACACCGAA AACACCGCGC GATTTGCCGC GGCTGTTGAG
GCACATCTGC GCGCAGGCGG CGCCGCGATC ATCGCCACTC ATATCGACCT GGGCCTGCCC
AATGCGCGCA GTCTCGACAT CACGCCCTTC ATCGCCAAGG GGTTGCCCGC GTCCGATCCG
TTCGCCGACG ATCCATTTCT TGGGGCGGCC CTGTGA
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| Protein sequence | MVLTVTDLAC ARGPAQVLSG VSFSVSAGEA LILRGPNGAG KTTLLRTLAG LTPPLAGTIS
HAEDAIAYAA HADGLKAQLT VAENLTFWAT IFGTLDIAPA IAAFALAPLA DRPAGELSAG
QKRRLSLARL LVTGRPIWAL DEPTVSLDTE NTARFAAAVE AHLRAGGAAI IATHIDLGLP
NARSLDITPF IAKGLPASDP FADDPFLGAA L
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