| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_2630 |
|---|
| Symbol | |
|---|
| ID | 3935093 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Jannaschia sp. CCS1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007802 |
|---|
| Strand | - |
|---|
| Start bp | 2646127 |
|---|
| End bp | 2646705 |
|---|
| Gene Length | 579 bp |
|---|
| Protein Length | 192 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 637904994 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_510572 |
|---|
| Protein GI | 89055121 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.0481059 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTTGCCC GAAGAACTTT TCTGACAACT GGCGCGTCTG CACTGCTAGT GGCTAGCTGC
GGAAACGCGC AGACCGCTGG CGATACAGGC GGATTGACGC AAGCTACTCT ACGACGTGTC
GTGCGGGTGC GGTTCGATGC GTCCCCTGCC GAAATTCTGC CGCAGCTTTT GACCCAAGTA
GCCACCTACG ATCCAACGAT ATCGGAGGTT CGTTTTGATC ACTCGCGCAG CAGCGCACCT
GGCGAAATGG GTGTCGGCAG TGTGCGCATC TGTGTGTTTG AGGATGGTCG CGAACTGCAC
GAGCCGCTTC TCGTCTACGA TCCGCCCCAT GCCTACGCCT ACACGGTCGA TCAGGACGCA
TCGACCCTGT CACTGCCGGT TTCCGAGATC GTGCTGGCCT ATGAATTCGC TGACAACAAC
GCGGGCGGCA CTGACCTGAC CGTCAGAGTG TTTTTCGATC CCCGCATTCC CGGAACTGGC
CCGGTGATCA CGCCGGTCCT GACCGGCACC GTGCGCCGAA CCTTCCAGAC CGCCGTGTCC
GTGTTTGGCG GTGAATACCT CGGGGACGAG CGGCCCTAG
|
|---|
| Protein sequence | MLARRTFLTT GASALLVASC GNAQTAGDTG GLTQATLRRV VRVRFDASPA EILPQLLTQV
ATYDPTISEV RFDHSRSSAP GEMGVGSVRI CVFEDGRELH EPLLVYDPPH AYAYTVDQDA
STLSLPVSEI VLAYEFADNN AGGTDLTVRV FFDPRIPGTG PVITPVLTGT VRRTFQTAVS
VFGGEYLGDE RP
|
|---|
| |