| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_2616 |
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| Symbol | |
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| ID | 3935079 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | - |
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| Start bp | 2635047 |
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| End bp | 2637761 |
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| Gene Length | 2715 bp |
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| Protein Length | 904 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637904980 |
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| Product | AMP-dependent synthetase and ligase |
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| Protein accession | YP_510558 |
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| Protein GI | 89055107 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.14755 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.232695 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCAGATC GCGATCGCAC GGTCACCTAT GGCGGGCTTG GCCAGTTCGC GACACAACTG
GGCGTGCATC TGGAAACGCC GCAGGTTGTG GGCGTCTTTG GCGCGCCGGG CGTTGCCATG
GCGGCGAGTG CGGTGGCCTG CGTGGTCCAT GGCCGCCCCT TTGTGCACCT TGACCCGGCC
ATGCCGCAGA TGGTGCTGCA CAATATCGTC TCGGAATTGC AGGTCAGCCT GATTGTCACC
TGCCAGCGCG CGGATCCGGG GCAGCTGCCC CGCGACTGCG CCACGATCGA CGCCAATGAC
CTGCTGAATG CCGCGCCCGC GCCGTATGCT CCGCTGCAAG CGGCCCCCGT TGCGCCGGAC
GATCCCATCT ATCTGGTGGC CACGTCCGGC ACGACGGGGC GCCCCAAGTG CATTCCCGTG
GCCCAGGACG CGGCCTATCT GTCGTATGCT TGGCGCGACG CGTTCACGCC CTACGGCCCG
GACACGCGCG TCGGTATCTA TGTCTTCGCG ATCTGGGAGA TGTTCCGCCC GCTGCGCAAG
GGGGCGGGGC TGTGGTTTCC CGATGCCAGC ACGTTGTTCG CGCCGGGACA GCTGGCCGAT
TTTCTGATCG CCCACGATAT CGACGAGATG CTGTTCACGC CGTCGTTCTA CGACACGTTC
CTGAATGCGC TGGACGGCGA CAAGGCGGCG GCCCTTCCCC TCAGCCGGGT GATCCTGAAC
GGCGAGGTTG TCGGCGATGA CCTGATCATC GCGTCGCTGG CCAAGCTGCC GGGCACGGCG
CTGTGGAACC TCTACAGCAT CTGCGAGACC CATGATGTCT GCATGTCCCA TCTGACAGAA
CCCGCTGGCG ATGGGCCCGC GTCGGTGGGT GTCCCGATGG AGCATCTGCG CGCCGTCATT
CTGGATCAGG CCGACGCCCC ATGCCCGCCC GGCACCTCGG GCCAGCTGCA TTTCGAGGGG
CCAAGGATGC TGGGGCCCGG CTACGTCAAC CGGCCCGAGG AAACCCGCCT GCGGTTTCGC
GAGGTGACGC TTCAGGGGCG TGAGACGCGC CTTTACGACA CCGGCGATCA GGCGTGGGTG
GATGCCACCG GTGCGCTGCA TATCGAGGGG CGCATCGCCC ATATGCTGAA GCTGCGCGGG
TTCTCGGTCC AGACGCGGGA GCTGACGGAC ACGATGCGCG ACCGGCTGGC GTTTTCCAGC
GCCGCGCCCT GGGTGGCAGA GGTCGGCGCG CGCGGTCAAA GCCTGATCTT CTACTTCGCC
GCTGACGCCG CACAGGCAAG GCGCAATGCG GAACAATGGG GCCTGAAGGC GGGAACCAAC
AAGATGCCAG CGGCCCTTGC CGCCGATCTG CGCGCCGTGT TGCCGGCCTA TTGCGTGCCG
TCGTTCCTCG TGCAGATGGA CGCGCTGCCC CTGCATCCCG TGTCGGGCAA GGCGGATCTG
CGCGCGCTGC CTGCGGTTGA GGAGGACGAC CACGGATCAG ACTTCGCTGA GGATGCCGTG
ATTGCCGCCG CCGCCCTCGC CATGTCCTGT GCGCCGTCGC AGATCGACCC GGCGCTGAGT
TTCCACGATC AGGGTGGCGA TTCACTGATG TGCGTGACCC TGATGCTGGA GCTGGAGAAG
ACCTACGGCC TGCCCATCGA CTTCGATCTG GCGATGAATG TGCCGCTGCA CCGGCTCGAC
CAGTTGATGA CGCAGGAGGC CGACGCCCCC GCCCCGGCGG AAGACTTCGG CCGCCCGGGC
ATCCTTTTGA CCGGCGCGAC GGGGTTTCTG GGTGGCCATG TTCTGGCAAA AGCGGCACGC
GATCTGCCGG AGGGAGAGGT CGTTTATTGC CTTGTCAGAG ACAAGAACCG GGGGGCCAGG
GACCGGCTGG ATGAGGCGGC GCAGTCCCAT GGGGTCGCCC CTGATCGCTA CGTGATCGTC
CATGGCACCC TGGATGCGCC CCGCTTCGCT TTGGAGGCCG ATGCCTATGC CGCGTTGAGC
GGTTCGGTCA GCCGCGTCAT CCACTGCGCG GCGATGGTGA ACCTCGCCAT CGGGCGGCAG
GAGATGCTGG ATTGGTCGGC GCGCGGGATG GACACCGTCC TGACCTTCTG CGCCGATGCC
CGGGCCGACC TGCGCTTCAC CTCCTCAAGC GCGGTCTTCC CGGACCGGGG CGGGCCGTGG
CCCGAAGCTC CCGCGACCCC GTGGGACGGC TGCACCGGCT ATGGCGCGGC CAAGATCGCG
GCGGAGGCGG CAATTCGCGC CGCCGACATC CCGGCGGCCA TCGTGCGCCT GCCGTCGCTC
TATGATCTGG ACGCGCCCAA CCCGCGCGAC ATCTATGAGA TCATCCTCAA GGCGTCCCTG
CGCGCGGGCC ACATGCCGCA GGCGCTTGAA TTTCCGATGA CCGATGTGAC CGCCGCCGCC
GCCTTCCTGC TCGGCCCGAT CACGGCCCCG GACGCCCCGA TCTACAACCT GATGGCCGAT
GCGCGCATCG CGCCGGACGA CCCAAACGCG CTGCCCGCGA CGGACTGGCT GGCCAGGGTC
ACACTGGACC CCGGCATCGC CAAGGTCATC GCCGACTTCC CCGACACCCT TTGCGCCTCT
TCCGACTTTG AGAACACAGC CGCCCGTGCT GCTTGGGAAC GGGTCAGCGC CCTTCCATTC
AACGAAATCA GTGACAGCGA AGCCCTGCTA ACGCGCCGCG CCCGCGACTA CCAAAGCGAT
CCCGCGTTGA CCTGA
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| Protein sequence | MSDRDRTVTY GGLGQFATQL GVHLETPQVV GVFGAPGVAM AASAVACVVH GRPFVHLDPA
MPQMVLHNIV SELQVSLIVT CQRADPGQLP RDCATIDAND LLNAAPAPYA PLQAAPVAPD
DPIYLVATSG TTGRPKCIPV AQDAAYLSYA WRDAFTPYGP DTRVGIYVFA IWEMFRPLRK
GAGLWFPDAS TLFAPGQLAD FLIAHDIDEM LFTPSFYDTF LNALDGDKAA ALPLSRVILN
GEVVGDDLII ASLAKLPGTA LWNLYSICET HDVCMSHLTE PAGDGPASVG VPMEHLRAVI
LDQADAPCPP GTSGQLHFEG PRMLGPGYVN RPEETRLRFR EVTLQGRETR LYDTGDQAWV
DATGALHIEG RIAHMLKLRG FSVQTRELTD TMRDRLAFSS AAPWVAEVGA RGQSLIFYFA
ADAAQARRNA EQWGLKAGTN KMPAALAADL RAVLPAYCVP SFLVQMDALP LHPVSGKADL
RALPAVEEDD HGSDFAEDAV IAAAALAMSC APSQIDPALS FHDQGGDSLM CVTLMLELEK
TYGLPIDFDL AMNVPLHRLD QLMTQEADAP APAEDFGRPG ILLTGATGFL GGHVLAKAAR
DLPEGEVVYC LVRDKNRGAR DRLDEAAQSH GVAPDRYVIV HGTLDAPRFA LEADAYAALS
GSVSRVIHCA AMVNLAIGRQ EMLDWSARGM DTVLTFCADA RADLRFTSSS AVFPDRGGPW
PEAPATPWDG CTGYGAAKIA AEAAIRAADI PAAIVRLPSL YDLDAPNPRD IYEIILKASL
RAGHMPQALE FPMTDVTAAA AFLLGPITAP DAPIYNLMAD ARIAPDDPNA LPATDWLARV
TLDPGIAKVI ADFPDTLCAS SDFENTAARA AWERVSALPF NEISDSEALL TRRARDYQSD
PALT
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