| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_2561 |
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| Symbol | |
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| ID | 3935024 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | - |
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| Start bp | 2563041 |
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| End bp | 2563934 |
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| Gene Length | 894 bp |
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| Protein Length | 297 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637904925 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_510503 |
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| Protein GI | 89055052 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0506375 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCCATA AGCTCGAAAT GTTCATCGCC GTGGCGCGGG AAGCGCACTT TGGTCGAGCG
GCGGAAAGCC TTGGCCTGAC GCAGCCCACA TTATCAACTG GAATCAAGCA GTTGGAAGAG
ATGTTGGGCG TGCAGCTGAT CTTTCGGGGC TCTCGCTACG GCGGCCTCAC GCCGGAAGGG
CAACGCGCGC TGGTCTGGGC GCGCCAGCTT GTCAGCGACG CGCGGACGTT CCGGCAGGAG
ATGCGCACCG CGCGCCACGG GCTCAGCGGG ATCGTGCGCC TTGCCGTCAT CCCCACGGCA
CTCACCTGGG CCGCGCATCT GAGCGCACGC TTTTCGGCCG CGCACCCCAA TGTCCGCTTT
TCCATCCTCA GCCGAACGTC CGCAGAGATC CTGTCGATGC TGGAAAATCT GGAGGCGGAT
GCGGGGCTCT CCTACCTCGA CAATGAACCT CTGGGGCGTG TGACCACGGA ACCGCTCTAC
CGCGAACGTC ACACCGTCGT GGCCCATCGC GACAGCGATA TTGCCATGCA GGACAAGGTC
GAATGGGCCG ATCTGGCTGG AGAGCGGTTG TGCCTTCTGA CGCCCAACAT GCAGAACCGG
CGGATCATCA ACGAATATTT CATGGCGGCA GGCATCGCGC CCGAGGCGCA GGTTGAAAGC
AATTCCACGG TCGTGCTGGC GGCCCATGTG GAGGCGGGCG ACTGGATCAC GATCCTGCCC
GTCGACATGG CGCGCTTCTT GTGTGGCGGC AAACCGCATC TGGTCATTCG CGAGATTGAG
GGGACGGGCA TGGACCACGC CGTGGGCCTC GTCGCGCCCT ATCGGGAGCC CCATACGCCG
GTGCTGAACG CCCTGATTTC CGAGACTCGG GCGCTGGCAA AGGCCCATGC CTGA
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| Protein sequence | MIHKLEMFIA VAREAHFGRA AESLGLTQPT LSTGIKQLEE MLGVQLIFRG SRYGGLTPEG
QRALVWARQL VSDARTFRQE MRTARHGLSG IVRLAVIPTA LTWAAHLSAR FSAAHPNVRF
SILSRTSAEI LSMLENLEAD AGLSYLDNEP LGRVTTEPLY RERHTVVAHR DSDIAMQDKV
EWADLAGERL CLLTPNMQNR RIINEYFMAA GIAPEAQVES NSTVVLAAHV EAGDWITILP
VDMARFLCGG KPHLVIREIE GTGMDHAVGL VAPYREPHTP VLNALISETR ALAKAHA
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