| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_2527 |
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| Symbol | |
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| ID | 3934990 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | + |
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| Start bp | 2525584 |
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| End bp | 2527284 |
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| Gene Length | 1701 bp |
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| Protein Length | 566 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637904891 |
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| Product | MscS mechanosensitive ion channel |
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| Protein accession | YP_510469 |
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| Protein GI | 89055018 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0668] Small-conductance mechanosensitive channel |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.131998 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.145786 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTGCAT TAAAGTTTTT CCGCGCCAGC ATTGGCGCCA TCTTCGTTTC TGTCTTTGTT
TGCTTCGCTC TGCTTGCCGT GACGTCCGCG CCGACCTGGG CGCAGGACGA TCCGTTCTAC
GACATTGATG GCTTGAACCC CGGCCTTGGT GCCGTACCGG ACTCCATCGA CAGATCCACG
CCGCGGTCCG CCATGGAGAG TTTTCTGCGC GCAGCTGACG AGGAGGATTG GGCGGCGGCC
GCCCATCTAC TGGATCTCGG CGCGTTATCT TCAGCAGATC AGGCCCGCGA CGGCGCAACG
CTTGCGCAGA AGTTGCATAT GATTGTCGAA CGGCGTGCGC TGCTGGATTG GTCGCTTCTG
GTGGATCGGC CCGATGGCCT TGATGCGCGC GCATCCGATC AGGACACGAT GGGAGGACAG
CCGCGCCGGT CCCTTCTGCT GCGGGAACTG GCGCTTGATC CTGTTCCCGC GACCCTGCGC
CTGAACCGCG TTCGTCCCGG CGGCGACGGA ACGGAGCTTG TCTGGGTCTT CCCCCGCGCC
ACGGTGGATG AGATTGAGCC TCTCTTCGAC CGCTACGGTC CCTCCCCATT TGAGCAGATG
TTGCCCTCCG CGCTGCGGGC AGAGGCCGTG GGTGGGCTGA TGATCTGGGA GTTGATCGGC
TTGCCCCTGC TTATCACTCT GGCCTGTCTT GCCGGTTGGC TTGCCGCATT CGGCTTTCGG
CTGGGGCGGC AATGGCTCCA CCACGCGTCG CATAAATTGC TCGACGCGGC GCGCCTGCCC
GCAATTATCG CAGCGGTGAC GGCTGTGCTC TCCTGGGGCA CGCAGGAGGT TTTTGTGTTC
TCCTCCGTGT TGTCTGTCTT CATTTCCCCG CTTGTAGCGG TCGGGTACAC GACAGCGGCG
CTGATGCTGG TGATGAACGG TCTCGGGGCC ATTCTGGAGC GTCTTCTGGG TCCCGAAGCC
GCCGATCTGA CCCACCGCGA AGTGGCGGAA GCGCGCGAAG CGGCCACACG CGTGGCGGCC
CTGCGCCATA TCCTGACGGT GCTGGTCTTT GTCATCGGGG CAGGCATCGT GCTGTCGAGT
GCCAGTATCT TCCGCAGCTT TGGCCTGTCG CTTCTTGCCT CCGCCGGTGC CTTGACGCTG
ATCATTGGCT TCGCCGCGCG TCAGGTTCTT GGAAACATCA TGGCAAGTCT GCAGATCGCC
CTGAACCAAT CGGCCCGGGT CGGCGACCGC ATCATGTGGC AGGACCGGCT GTGTTATGTC
GAGAAGATCA ACTTCACCTA CATTCTGTTG CGCAATTGGG ATGACACGCG CGTCGTCGTG
CCAGTGTCCG AATTCGTGAC CGAGACGTTC GACAACTGGA CCCTGGAAGA TCCGGGCATC
AAGCGGATCC TCAAGCTGAA GCTGTCGCCA GAGGCAGATG TCGCCGCCTT GCGGGAGGCC
TTCAACGACA TCATGGATGA CATGAAAGCG GGCGAGTTGG GCAGCGAGTT GGGTGATCTA
GAAGAGGCGA CCGTGAATGT CGCGGGTCAG GATGCGTTGG GCGTCGATGT CTGGTTTGCT
GTGCCATGCC TTGATCCCTC AACCCAATGG GAGGTGTCCT GCGAAGCCCG CGAGCGGTTG
ATCAAGGCCG CGTCCCAGAT TGCCGAGCAG ACGGGCCGGG CGGTGTTCCC TGAAGGCGCG
GCATTGGATG CCGCGGCATG A
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| Protein sequence | MTALKFFRAS IGAIFVSVFV CFALLAVTSA PTWAQDDPFY DIDGLNPGLG AVPDSIDRST
PRSAMESFLR AADEEDWAAA AHLLDLGALS SADQARDGAT LAQKLHMIVE RRALLDWSLL
VDRPDGLDAR ASDQDTMGGQ PRRSLLLREL ALDPVPATLR LNRVRPGGDG TELVWVFPRA
TVDEIEPLFD RYGPSPFEQM LPSALRAEAV GGLMIWELIG LPLLITLACL AGWLAAFGFR
LGRQWLHHAS HKLLDAARLP AIIAAVTAVL SWGTQEVFVF SSVLSVFISP LVAVGYTTAA
LMLVMNGLGA ILERLLGPEA ADLTHREVAE AREAATRVAA LRHILTVLVF VIGAGIVLSS
ASIFRSFGLS LLASAGALTL IIGFAARQVL GNIMASLQIA LNQSARVGDR IMWQDRLCYV
EKINFTYILL RNWDDTRVVV PVSEFVTETF DNWTLEDPGI KRILKLKLSP EADVAALREA
FNDIMDDMKA GELGSELGDL EEATVNVAGQ DALGVDVWFA VPCLDPSTQW EVSCEARERL
IKAASQIAEQ TGRAVFPEGA ALDAAA
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