| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_2521 |
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| Symbol | |
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| ID | 3934984 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | + |
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| Start bp | 2521597 |
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| End bp | 2522409 |
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| Gene Length | 813 bp |
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| Protein Length | 270 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637904885 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_510463 |
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| Protein GI | 89055012 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.146883 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.194873 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTGGGATG ACCTGGCGCT TTTCTCGGCC GTGGCCCGGC ACGGCAGCCT CACCGCGGCC
GCCACCCAGA CGGACAGCAG CGCGGCGACC CTCAGCCGCC GCATGAAGGC GCTAGAGGCT
GCAATGGACC GCCCGCTCTT CCTGCATGGA CGCGACGGCT ATGCCCTGAC CGCCGAGGGA
CGGGAGTTGT TGCAGCGCAC CGAGCGGATG GAGGCCGCCG CCGCCGATAT CGAATCCTGG
CGCAATCAGG GACCGGGCAA GCGCCGCGTC CGGATCTCTG CCGGATCTTG GACGTCGGAC
CTTCTGGCGC GGCATCTGGC TGACTTCTGG CAACCCGACT TCAATTGGGT GCCCGAGTTT
CTGCATTGTG AGCGCGATAT GGACATCGCC CGGCGGCAAA TCGACATCGG CGTTCGCAAT
CACAAACCCG ATCAGCCCTG GCTGGCGGGG CGACGCACCG GAGAGGTCAA CTTCGCCCCT
TTCGCCCGCG ACACCAGTGT CACGGAATGG ATCGGGGCTG CGGGCGACCG TGCGACCCTG
CCATCCGCGC GCTGGGTCGA TGAAAATCAG TCCGATCACA TCGTCACCCG CGCCAATGAC
GCGCATCTGG CGATGGCCAT GGCCTGCGCG GGGATCGGGC GCGTTGTATT GCCGACTTTC
GTGGGCGCGT CCGCCAGAAC GCTGGTCCAG GTGGGCGAGC CGATTGAGGC GCTTCGGTCC
GAGCAGTGGC TGGTCTGCCA CCACGAGGGT CGCCATGATC CGCCTGTGCG CCATGCGTTG
ACGGCGTTGG CGCAGTTTCT AACGAGCAGC TAG
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| Protein sequence | MWDDLALFSA VARHGSLTAA ATQTDSSAAT LSRRMKALEA AMDRPLFLHG RDGYALTAEG
RELLQRTERM EAAAADIESW RNQGPGKRRV RISAGSWTSD LLARHLADFW QPDFNWVPEF
LHCERDMDIA RRQIDIGVRN HKPDQPWLAG RRTGEVNFAP FARDTSVTEW IGAAGDRATL
PSARWVDENQ SDHIVTRAND AHLAMAMACA GIGRVVLPTF VGASARTLVQ VGEPIEALRS
EQWLVCHHEG RHDPPVRHAL TALAQFLTSS
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