| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_2512 |
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| Symbol | |
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| ID | 3934973 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | + |
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| Start bp | 2511368 |
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| End bp | 2511967 |
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| Gene Length | 600 bp |
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| Protein Length | 199 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637904874 |
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| Product | short chain dehydrogenase |
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| Protein accession | YP_510454 |
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| Protein GI | 89055003 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.296656 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.253878 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGGATCA TCGTTGTCGG AGCATCTGGG GATATCGGGC AGGCCGCATG TCGGGCGCTG
GAGGGGACCC ATGACCTGAT CCGTGTCGGG CGATCCTCAG GCGACATAAC GGCCGACATG
AGCGATCCGC GGGCGGTGGC CGAGATGTAC CGCCAAACGG GGCCAGTTGA TGCCGTGGTC
TGCACCGCCG GAGAGGTTCA TTTCGCCCTC CTGCTTGCGC AGACCCACGC CACGATGATG
GAAGGTTTGG CGCAAAAGAC CATGGGGCAG ATCAACCTTG TGCTTCAGGG GCTCACCCAT
GTTAGCGACG GCGGCTCCTT CACCCTGACC AGTGGCATCC TGGATCGCAA TCCGGTGCGT
GGTGGCGTGG GGGCTGCAAC CGCCAACGGC GCGCTTGCAG GCTTCGTGAC CGGGGCCGCG
ATCGAGATGC CCCGGCGGCT GCGTTTGAAC GTGGTCAGCC CCGGCATGCT GGACACCTCA
GCCAGACGAT ACGGCGCGCT GTTTCCGGGG CATATCCCGG TACCGGACCA CCGGGTCGGA
CAGGCCTATG TCAAATGCGT TGACGGCGCG ATGACGGGCC GGGTCATCTG CGTGGACTGA
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| Protein sequence | MRIIVVGASG DIGQAACRAL EGTHDLIRVG RSSGDITADM SDPRAVAEMY RQTGPVDAVV
CTAGEVHFAL LLAQTHATMM EGLAQKTMGQ INLVLQGLTH VSDGGSFTLT SGILDRNPVR
GGVGAATANG ALAGFVTGAA IEMPRRLRLN VVSPGMLDTS ARRYGALFPG HIPVPDHRVG
QAYVKCVDGA MTGRVICVD
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