| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_2419 |
|---|
| Symbol | |
|---|
| ID | 3934876 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Jannaschia sp. CCS1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007802 |
|---|
| Strand | + |
|---|
| Start bp | 2416500 |
|---|
| End bp | 2417594 |
|---|
| Gene Length | 1095 bp |
|---|
| Protein Length | 364 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 637904777 |
|---|
| Product | FAD-dependent pyridine nucleotide-disulphide oxidoreductase |
|---|
| Protein accession | YP_510361 |
|---|
| Protein GI | 89054910 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1252] NADH dehydrogenase, FAD-containing subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.591028 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.097204 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCTCAAA AATCCAAGGT CATTATCATC GGTGGCGGCT ACGGCGGTCT GCGGACCGCA
GCAGCCCTCC AAAACCAGGC CGATGTGACA ATCATTGATC GCAACACCTA CTTTCACCAC
AAGGCCGCTG CATTGCGCGG GCTTGTCGCA AAAGGTTGGG AAGATCGCAT ATATGTGGAT
TTTGCCGATA TCGGCTTGAA TGCCAGTTTT CGGCAAGGTG AGGTCACACA GGTTGATCCT
GATGCGCGCA ACGTCACGCT CGCAGATGGC GATGTAATGG GCTTCGATGA CCTTGTTATT
GCCACCGGTT CGACCACCGT ATTGCCAACC GAGACGTTCG GCGCGTCCGG TGCAGATGCG
CGGCGCAAAA TCACCGAGAT TATGCCGGAC TACGCAAAGG CAAAGCGGGT CATTGTCGTG
GGTGATGGCC CTGTCGGTGT GGAAATGGCG GGGGAATACC GGGATCTGTC ACCTGATATC
GACATCACAC TGGTGAGCAG TGCGGCCGCG CCGATGACAA CCGTGGGTAA CCCGAAATTC
AGCGCCCGCG TCGCGGATCT TCTCAAGCGG CAGAACATCA AGCGCATCGG CGGCAAGATC
GTTAGCGAGG TCGGCGATAC GCATGTCATC CTGTCTGATG GCACACGGGT GGACGGCGAT
ATCGTCGTGC AAGCGGTCGG GATCACGCCC AATACGGACT GGATCAGATC TTTCGCACCT
GACTGGTTAG ATGCGCGCGG TCAGGTCCGC GTTGACCCTG ACCTTTCAGT GGTTGGACAG
GACCGCATCT TTGCGCTTGG CGATTGTAGC GACATCTCGG AACCCAAGAT GCTCAAAATG
GCGGACGTGC AGGGCAAATA TCTCGGCGCC GCAATCCTCG CACGTCAAGC GGGCGACACC
CCCGACCCAT ACGAGCGCTT TACCAAGAAG CTGACCATTC TGCCCTTTGG CGCAAAAGAT
GGCGTGGCTC TGCTCCCGCT TGGTCAGGAG GGCAAAGTTG TATGGCGTCC GCTTGGTCGT
TTCCTCGTCG TCAAACGCAA GGGCACCCAC CTTCTCTCCA ACATGTTCCC GAGCAGTTAC
GCCGCATCAA AATAG
|
|---|
| Protein sequence | MSQKSKVIII GGGYGGLRTA AALQNQADVT IIDRNTYFHH KAAALRGLVA KGWEDRIYVD
FADIGLNASF RQGEVTQVDP DARNVTLADG DVMGFDDLVI ATGSTTVLPT ETFGASGADA
RRKITEIMPD YAKAKRVIVV GDGPVGVEMA GEYRDLSPDI DITLVSSAAA PMTTVGNPKF
SARVADLLKR QNIKRIGGKI VSEVGDTHVI LSDGTRVDGD IVVQAVGITP NTDWIRSFAP
DWLDARGQVR VDPDLSVVGQ DRIFALGDCS DISEPKMLKM ADVQGKYLGA AILARQAGDT
PDPYERFTKK LTILPFGAKD GVALLPLGQE GKVVWRPLGR FLVVKRKGTH LLSNMFPSSY
AASK
|
|---|
| |