| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_2328 |
|---|
| Symbol | |
|---|
| ID | 3934784 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Jannaschia sp. CCS1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007802 |
|---|
| Strand | - |
|---|
| Start bp | 2334487 |
|---|
| End bp | 2335821 |
|---|
| Gene Length | 1335 bp |
|---|
| Protein Length | 444 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637904686 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_510270 |
|---|
| Protein GI | 89054819 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0161] Adenosylmethionine-8-amino-7-oxononanoate aminotransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.134065 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACGCAAA CGCCCGGGAC CCACGTCTTC GGGCGGTCAA ACGCCACCCT TCGGCGGGCC
GTTTCGGGGG AGGGTTGCTA CATCATCGAC GCGGATGGCA CCCGTTTTCT TGATGGCTGT
TGCGGGGCGG CGGTCTCCTG CCTTGGCCAT TCCGACGCCA GCGTGCGCGC CGCCATGCAC
GCCCAGATCG ACGCGCTGGC CTATGCCCAT ACCGGATATT TCACCTCTGG CCCGGCGGAG
GATCTGGCCG ATCTGCTGAT CGACCACGCG CCGGACGGGA TTGAGAAGGT CTATTTCCTC
TCCGGCGGGT CGGAGGCGAT GGAAACCGCC CTGAAACTCG CGCGCCAATA TATGGTGGAG
ACGGGACAAC CGGGCCGTCA CAAGATCATC GCCCGGCGGC AAAGCTATCA TGGCAACACG
CTCGGCGCTT TGGCCGTGGG TGGCAACGCG GCACGGCGCG AGAAGTACCA GCCGTTGTTG
GTGGAGACGT CCCATATCAG CCCGTGCTTT GAATACCGGG GCCGTGCCGA CGATGAGAGC
GCGTTTGACT ACGGCCAGCG CGTCGCCAAT GAACTTGAAG CCGAGATCCA GCGCCTTGGC
CCCGAAACGG TCATGGCCTT CGTGGCCGAA CCCGTCGTGG GGGCCACTGC CGGAGCCGTG
CCGCCGGTGG ACGGCTACTT CAAACGTATC CGCGAGATCT GCGACCAATA CGGTATCCTG
TTGATCCTCG ACGAAGTCAT GTGCGGCATG GGCCGGACCG GCACCCTGTT CGCCTGCGAA
CAAGAGGGCA TCACTCCCGA CATCGTCGTC ATCGCCAAGG GCCTCGGCGC GGGCTACGTG
CCCATCGGCG CGATGCTGTG TTCCGGCACG ATCTACAACA CCATCTCCAA AGGGTCCGGC
GCGTTTGAAC ATGGGCACAC CTATCAGGCC CACCCGACCG CCGCCGCAGG CGCGCTGGCT
GTCGTCCGGG CCATGCTGGA CCGAGACCTG ATCCCCCGCG TGCGCGAACA GGGCGCAAAA
CTGGACGCCG CCTTGCAGGT CGAGTTTGGC CAACACCCCC ATGTGGGCGA TATCCGGGGG
CGGGGCCTCT TCCGCGCCAT TGAACTGGTC GAAGATCGCG CCACGAAAAC CCCCTTCGAT
CCGGCCCGAA AACTGGGCAC GGCAATCAAA GCGGCTGCGA TGGAGGAGGG GCTGATGATC
TACCCCGGCA GCGGCACGGC GGACGGCATG CGCGGCGACC ACATCCTCAT TGCGCCGCCC
TTCATCATCT CGGACGATCA GATCGACGAG CTGACGCAGA AACTGTCCCG CGCCTTGACC
CGCGTTCTCG CCTAA
|
|---|
| Protein sequence | MTQTPGTHVF GRSNATLRRA VSGEGCYIID ADGTRFLDGC CGAAVSCLGH SDASVRAAMH
AQIDALAYAH TGYFTSGPAE DLADLLIDHA PDGIEKVYFL SGGSEAMETA LKLARQYMVE
TGQPGRHKII ARRQSYHGNT LGALAVGGNA ARREKYQPLL VETSHISPCF EYRGRADDES
AFDYGQRVAN ELEAEIQRLG PETVMAFVAE PVVGATAGAV PPVDGYFKRI REICDQYGIL
LILDEVMCGM GRTGTLFACE QEGITPDIVV IAKGLGAGYV PIGAMLCSGT IYNTISKGSG
AFEHGHTYQA HPTAAAGALA VVRAMLDRDL IPRVREQGAK LDAALQVEFG QHPHVGDIRG
RGLFRAIELV EDRATKTPFD PARKLGTAIK AAAMEEGLMI YPGSGTADGM RGDHILIAPP
FIISDDQIDE LTQKLSRALT RVLA
|
|---|
| |