| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_2312 |
|---|
| Symbol | |
|---|
| ID | 3934768 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Jannaschia sp. CCS1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007802 |
|---|
| Strand | + |
|---|
| Start bp | 2316910 |
|---|
| End bp | 2317359 |
|---|
| Gene Length | 450 bp |
|---|
| Protein Length | 149 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 637904670 |
|---|
| Product | pentapeptide protein |
|---|
| Protein accession | YP_510254 |
|---|
| Protein GI | 89054803 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1357] Uncharacterized low-complexity proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.0828621 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCAGACA CGCCCCAGGA CACGCCAGAC GCCGGACGCG ACAAGCTTGA GATCTCCAAC
ATGTACCTGT GCGGCTCCAC CTTCACGGCC GTCAGCCTGA AGGATGCCAC CTTCACGGAC
AGCCACTTGA TGGATGCAAC ACTCAACGAC GTGAACGCCA CCGGGCTGAC CTTCGAGAAT
GTTAACCTGA CGGAAACCAA GCTCCACGAC GTGAACCTGG CCGAGGCCCA TATCGAGTAT
GCCAATCTGA CAGGCCTTAC GATCACCGAC GCCAACATGA CCGACACGAA GATCATCAAC
GTCAATTTGA CCGGCTTTCA TCTGTCGAAC GTGAACCTCA CGGGGGCCGA GATTTCCAAC
GCCAACCTGA CGGATATGAC GATTGAGGGG ATCAAAGTCA CCGACCTTCT GACCCTTTGG
AAAGACACCC ATGGCGCGCA AAGCGAATAG
|
|---|
| Protein sequence | MSDTPQDTPD AGRDKLEISN MYLCGSTFTA VSLKDATFTD SHLMDATLND VNATGLTFEN
VNLTETKLHD VNLAEAHIEY ANLTGLTITD ANMTDTKIIN VNLTGFHLSN VNLTGAEISN
ANLTDMTIEG IKVTDLLTLW KDTHGAQSE
|
|---|
| |