Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Jann_2248 |
Symbol | |
ID | 3934702 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Jannaschia sp. CCS1 |
Kingdom | Bacteria |
Replicon accession | NC_007802 |
Strand | - |
Start bp | 2256500 |
End bp | 2257507 |
Gene Length | 1008 bp |
Protein Length | 335 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637904605 |
Product | transport system permease protein |
Protein accession | YP_510190 |
Protein GI | 89054739 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0609] ABC-type Fe3+-siderophore transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCCAGC GCCTGCCGGT CCTGACGTCT CTGGCCCTTG CCGGATTGGT GCTGGCCGTT CTGGCCGGTA TCTTCTTCGG AACGGCAGAA GCGACGTGGA GCGACAGGTG GGCGGCGCTG GTGGGGGGGG CCGACGCGCC CCGCAGCCTG TCGCTGATCA TATGGGAATG GCGCCTGCCC CGGGTGCTGG CCGTCGCGGC GGTGGGGGCG AGCCTGGCGC TGGCAGGCGT GATGATGCAG ACGGTGCTGC ACAATCCGCT GGCCGATCCC TATCTGATGG GTCTGTCGTC GGGCGCATCT GCGGCGGCTG TGGGCACGAT CCTGTGGGCA CCCGCCTGGG TCGCCTCCAC CTTCGGCGTC CCGGTGATCG CCTTTTGCGG GGCCGTCGCC GCCTTCGCCA TGACGCTGGG TCTGTCGTTT CGGCGCGGCA CGATGATGTC ACCGCTGGTG GTTATTCTGG CAGGCGTCGC CGTGTCGCTG ATGTTCCAGT CCCTGACCGC CTTCTTCCTC TACGTGGGCG ATCCCCATGC GACGCGCACG GCCCTTGGCT GGCTCATGGG CACAGCCGCC GGCACCGCGT GGGAGGACCT CTGGCTGCCC CTGATCGCCC TTGCAGGCGT CACCACATAT GCGCGCCTCC ACGCCCAGAA TCTCGACGCG CTGCTTTTGG GGGATGAGCG GGCCATGGCG CTCGGCATCC CAGTGCGCAA ACTCCGGTTT GTCGTCTTCG GCGCCGTGGC GCTTCTAGCC GGGCTCTCGG TGGCGAGTGT TGGGATCGTC GGGTTCGTGG GCCTCATCGT GCCGCATATG GCGCGGCTTC TGGTGGGCGG GCGTCACCGG GTGCTGATCC CACTCAGCCT CGTGCTCGGC GCGCTTGTGC TGGTCGTGGT GGACCTTCTG TGCCGCATCC TTCTGGCGCC GGAGGAAATG CCCCTGGGGG TGTTGCTTGC TATCTTCGCG GCCCCGCCAT TCATCCTGAT CCTGCGGCGG GTGCGCCATG CCTTCTGA
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Protein sequence | MTQRLPVLTS LALAGLVLAV LAGIFFGTAE ATWSDRWAAL VGGADAPRSL SLIIWEWRLP RVLAVAAVGA SLALAGVMMQ TVLHNPLADP YLMGLSSGAS AAAVGTILWA PAWVASTFGV PVIAFCGAVA AFAMTLGLSF RRGTMMSPLV VILAGVAVSL MFQSLTAFFL YVGDPHATRT ALGWLMGTAA GTAWEDLWLP LIALAGVTTY ARLHAQNLDA LLLGDERAMA LGIPVRKLRF VVFGAVALLA GLSVASVGIV GFVGLIVPHM ARLLVGGRHR VLIPLSLVLG ALVLVVVDLL CRILLAPEEM PLGVLLAIFA APPFILILRR VRHAF
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